RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 KRT16P08779 473 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 PPATQ06203 517 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 ZNF449Q6P9G9 518 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 EPM2AIP1Q7L775 607 aaPredicted RBP18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 RMDN2Q96LZ7 410 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 HERPUD2Q9BSE4 406 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 C12orf65Q9H3J6 166 aaKnown RBP18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 TDRD3Q9H7E2 651 aaKnown RBP18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 KIF9Q9HAQ2 790 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 LRRC4BQ9NT99 713 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 SWAP70Q9UH65 585 aa18.33■□□□□ 0.53
PPP4R3A-208ENST00000555462 PPIP5K2O43314 1243 aa18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 RIPK2O43353 540 aa18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 DDR1Q08345 913 aa18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 CALCOCO2Q13137 446 aa18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 C10orf76Q5T2E6 689 aa18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 MICAL1Q8TDZ2 1067 aa18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 ALG13Q9NP73 1137 aaKnown RBP18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 MTRF1LQ9UGC7 380 aaKnown RBP18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 PHLPP1O60346 1717 aa18.33■□□□□ 0.52
PPP4R3A-208ENST00000555462 HIP1RO75146 1068 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 TMEM253P0C7T8 217 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 CHRNB2P17787 502 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 NOP9Q86U38 636 aaKnown RBP18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 ERICH1Q86X53 443 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 SIAH1Q8IUQ4 282 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 ACER1Q8TDN7 264 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 RASAL2Q9UJF2 1139 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 CPXCR1Q8N123 301 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 CPA5Q8WXQ8 436 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 SCN7AQ01118 1682 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 POC1B-GALNT4F8VUJ3 575 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 ATP2B4P23634 1241 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 KRT17Q04695 432 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 GRIPAP1Q4V328 841 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 UBL4BQ8N7F7 174 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 C10orf88Q9H8K7 445 aa18.32■□□□□ 0.52
PPP4R3A-208ENST00000555462 DLEC1Q9Y238 1755 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 DDX60LQ5H9U9 1706 aaKnown RBP18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 PI4K2BG5E9Z4 385 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 GOLGA8SH3BPF8 625 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 GOLGA8MH3BSY2 632 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SLC16A4O15374 487 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 BRAFP15056 766 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 ADCY8P40145 1251 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 PTGIRP43119 386 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SESN3P58005 492 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 APOBEC3HQ6NTF7 200 aaKnown RBP18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SLF2Q8IX21 1173 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SLC5A5Q92911 643 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 ARHGEF35A5YM69 484 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 ANKRD62A6NC57 917 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 CETPP11597 493 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 DGKZQ13574 1117 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 CNGA2Q16280 664 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 HYIQ5T013 277 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 MIGA2Q7L4E1 593 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 SLCO1B3Q9NPD5 702 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 VAV3Q9UKW4 847 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 R3HDM2Q9Y2K5 976 aaKnown RBP18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 KAT6AQ92794 2004 aa18.31■□□□□ 0.52
PPP4R3A-208ENST00000555462 MMP13P45452 471 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 BFSP1Q12934 665 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 RRP1BQ14684 758 aaKnown RBP18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 TMED2Q15363 201 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 EAPPQ56P03 285 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 ZNF720Q7Z2F6 126 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 RPAINQ86UA6 219 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 ZNF564Q8TBZ8 553 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 LXNQ9BS40 222 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 PITPNM2Q9BZ72 1349 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 THAP12O43422 761 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 PHF2O75151 1096 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 EYA4O95677 639 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 CBWD2Q8IUF1 395 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 PLEKHO2Q8TD55 490 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 ZSWIM1Q9BR11 485 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 CARD9Q9H257 536 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 TCP10L2B9ZVM9 353 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 BANF1O75531 89 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 IL1R1P14778 569 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 STX2P32856 288 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 RFX8Q6ZV50 586 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 C4orf33Q8N1A6 199 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 FITM2Q8N6M3 262 aa18.3■□□□□ 0.52
PPP4R3A-208ENST00000555462 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 COILP38432 576 aaPredicted RBP18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 NPEPPSP55786 919 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 DNAJC3Q13217 504 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 SH3BP5LQ7L8J4 393 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 TEKT1Q969V4 418 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 MIEF2Q96C03 454 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms