RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SPATA31C1P0DKV0 1188 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 ITGA4P13612 1032 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 ARF4P18085 180 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 GLRA2P23416 452 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 TXKP42681 527 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 TRAPPC10P48553 1259 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 HMGN5P82970 282 aaKnown RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 MBTD1Q05BQ5 628 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 DSC1Q08554 894 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 SIGLEC14Q08ET2 396 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 CAPSQ13938 189 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 PTPN14Q15678 1187 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 AMHR2Q16671 573 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 PTPN21Q16825 1174 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 FAM187BQ17R55 369 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 KIAA1841Q6NSI8 718 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 LLGL2Q6P1M3 1020 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 ZNF280BQ86YH2 543 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 COLGALT2Q8IYK4 626 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 GPR65Q8IYL9 337 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 HACE1Q8IYU2 909 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 RNF168Q8IYW5 571 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 SMG8Q8ND04 991 aaKnown RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 MCPH1Q8NEM0 835 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 ASAP3Q8TDY4 903 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 BCL7CQ8WUZ0 217 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 C8orf76Q96K31 380 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 RPGRIP1Q96KN7 1286 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 ZSCAN31Q96LW9 406 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 RIPOR3Q96MK2 946 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 CCDC43Q96MW1 224 aaKnown RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 FAM193BQ96PV7 902 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 PRRX2Q99811 253 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 VN1R3Q9BXE9 311 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 TMEM60Q9H2L4 133 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 UPF2Q9HAU5 1272 aaKnown RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 SH2B1Q9NRF2 756 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 BMP2KQ9NSY1 1161 aaPredicted RBP7.34□□□□□ -1.23
SLIRP-203ENST00000554074 DNAJB4Q9UDY4 337 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 SSX2IPQ9Y2D8 614 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 FAN1Q9Y2M0 1017 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 GIT1Q9Y2X7 761 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 IPPQ9Y573 584 aa7.34□□□□□ -1.23
SLIRP-203ENST00000554074 A0A1B0GUA9 196 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 ARL5CA6NH57 179 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 NRP1O14786 923 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 B4GALT3O60512 393 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 PAPLNO95428 1278 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 SEC24BO95487 1268 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 SOD2P04179 222 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 RPA1P27694 616 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 MCM7P33993 719 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
SLIRP-203ENST00000554074 LONRF3Q496Y0 759 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 C8orf34Q49A92 452 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 ATAT1Q5SQI0 421 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 HAUS3Q68CZ6 603 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 CDCA2Q69YH5 1023 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-203ENST00000554074 SLC27A1Q6PCB7 646 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 CYP26C1Q6V0L0 522 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 CATSPER3Q86XQ3 398 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 UBALD2Q8IYN6 164 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 ZDHHC14Q8IZN3 488 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 PLCD3Q8N3E9 789 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 TMEM87AQ8NBN3 555 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 FBXO18Q8NFZ0 1043 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 ERMNQ8TAM6 284 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 NACC1Q96RE7 527 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 GAD1Q99259 594 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 HERC2P3Q9BVR0 1158 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 EMILIN2Q9BXX0 1053 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 EIF2AQ9BY44 585 aaKnown RBP7.33□□□□□ -1.24
SLIRP-203ENST00000554074 RHOBTB2Q9BYZ6 727 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 GBP3Q9H0R5 595 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 POLR3FQ9H1D9 316 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-203ENST00000554074 SFXN1Q9H9B4 322 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 MRPL17Q9NRX2 175 aaKnown RBP7.33□□□□□ -1.24
SLIRP-203ENST00000554074 PRMT7Q9NVM4 692 aaPredicted RBP7.33□□□□□ -1.24
SLIRP-203ENST00000554074 USTQ9Y2C2 406 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
SLIRP-203ENST00000554074 USO1O60763 962 aaKnown RBP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 MED24O75448 989 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 NR1I2O75469 434 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 POMCP01189 267 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 URODP06132 367 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 ADH1AP07327 375 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CNPP09543 421 aaKnown RBP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 EPCAMP16422 314 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CYP11B2P19099 503 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 U2AF2P26368 475 aaKnown RBP eCLIP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CA8P35219 290 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 MLH1P40692 756 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 GLUD2P49448 558 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 RBM25P49756 843 aaKnown RBP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 FXR2P51116 673 aaKnown RBP eCLIP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CLCN4P51793 760 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 GRIK3Q13003 919 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 PPP2R5AQ15172 486 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms