RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 CD2APQ9Y5K6 639 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 VWA5AO00534 786 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 TLR2O60603 784 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 MDH1P40925 334 aaKnown RBP10.48□□□□□ -0.73
DDX11-229ENST00000545668 HMGCS2P54868 508 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 ITGB3BPQ13352 177 aaPredicted RBP10.48□□□□□ -0.73
DDX11-229ENST00000545668 PRKG1Q13976 671 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 COG2Q14746 738 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 NAB2Q15742 525 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 CACNA2D3Q8IZS8 1091 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 MRRFQ96E11 262 aaKnown RBP10.48□□□□□ -0.73
DDX11-229ENST00000545668 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
DDX11-229ENST00000545668 MLXIPLQ9NP71 852 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 TBC1D22BQ9NU19 505 aa10.48□□□□□ -0.73
DDX11-229ENST00000545668 LARSQ9P2J5 1176 aaKnown RBP10.48□□□□□ -0.73
DDX11-229ENST00000545668 RPTORQ8N122 1335 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 MYH10P35580 1976 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 K7ENM7 598 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 LCA5LO95447 670 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 UCHL3P15374 230 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 CNGA1P29973 690 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 QARSP47897 775 aaKnown RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 PGM5Q15124 567 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 SNCBQ16143 134 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 HIBCHQ6NVY1 386 aaPredicted RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 WHAMMQ8TF30 809 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 SLC35C1Q96A29 364 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 MAP3K20Q9NYL2 800 aaKnown RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 TMOD4Q9NZQ9 345 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 PNMA2Q9UL42 364 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 UBIAD1Q9Y5Z9 338 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 FZD9O00144 591 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 EXOC3O60645 756 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 PON1P27169 355 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 BAATQ14032 418 aaPredicted RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 GLE1Q53GS7 698 aaKnown RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 B3GNT9Q6UX72 402 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 OTUD6AQ7L8S5 288 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 NIPA1Q7RTP0 329 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 PHLDB2Q86SQ0 1253 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 USP38Q8NB14 1042 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 ARMC2Q8NEN0 867 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 GRID2IPA4D2P6 1211 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 DHX15O43143 795 aaKnown RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 TRIM49P0CI25 452 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 TRIM49CP0CI26 452 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 HSD17B3P37058 310 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 GKAP1Q5VSY0 366 aaPredicted RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 SNRNP48Q6IEG0 339 aaKnown RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 ZNF746Q6NUN9 644 aaPredicted RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 RPUSD2Q8IZ73 545 aaKnown RBP10.47□□□□□ -0.73
DDX11-229ENST00000545668 GLG1Q92896 1179 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 WNK4Q96J92 1243 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 EPN3Q9H201 632 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 GANQ9H2C0 597 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 PCIF1Q9H4Z3 704 aa10.47□□□□□ -0.73
DDX11-229ENST00000545668 RPS6KA5O75582 802 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 PTPRAP18433 802 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 ZNF131P52739 623 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 ERVK-9P63128 1117 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 MESDQ14696 234 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 ASTE1Q2TB18 679 aaPredicted RBP10.46□□□□□ -0.73
DDX11-229ENST00000545668 CCDC38Q502W7 563 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 CCDC105Q8IYK2 499 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 METTL13Q8N6R0 699 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 ANKRD42Q8N9B4 389 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 PDCD2LQ9BRP1 358 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 RNF14Q9UBS8 474 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 RIPK3Q9Y572 518 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 HMGB1P1B2RPK0 211 aaPredicted RBP10.46□□□□□ -0.73
DDX11-229ENST00000545668 SPOPO43791 374 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 SMIM24O75264 130 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 FDX1P10109 184 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 YWHABP31946 246 aaKnown RBP10.46□□□□□ -0.73
DDX11-229ENST00000545668 FAM133BQ5BKY9 247 aaKnown RBP10.46□□□□□ -0.73
DDX11-229ENST00000545668 ZNF571Q7Z3V5 609 aaPredicted RBP10.46□□□□□ -0.73
DDX11-229ENST00000545668 APOBEC3FQ8IUX4 373 aaKnown RBP10.46□□□□□ -0.73
DDX11-229ENST00000545668 OSGEPQ9NPF4 335 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 PLCB1Q9NQ66 1216 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 PXMP2Q9NR77 195 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 AGPAT3Q9NRZ7 376 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 AIPL1Q9NZN9 384 aa10.46□□□□□ -0.73
DDX11-229ENST00000545668 ZNF541Q9H0D2 1346 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 GMNCA6NCL1 334 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 A6NNZ2 444 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 RGS16O15492 202 aaPredicted RBP10.46□□□□□ -0.74
DDX11-229ENST00000545668 ATP9AO75110 1047 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 TUBB8Q3ZCM7 444 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 MYCBPAPQ8TBZ2 947 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 KCNV2Q8TDN2 545 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 KLC4Q9NSK0 619 aa10.46□□□□□ -0.74
DDX11-229ENST00000545668 ZMYM2Q9UBW7 1377 aa10.45□□□□□ -0.74
DDX11-229ENST00000545668 RARRES1P49788 294 aa10.45□□□□□ -0.74
DDX11-229ENST00000545668 POLE2P56282 527 aa10.45□□□□□ -0.74
DDX11-229ENST00000545668 PTGISQ16647 500 aa10.45□□□□□ -0.74
DDX11-229ENST00000545668 DENND2CQ68D51 928 aa10.45□□□□□ -0.74
DDX11-229ENST00000545668 NLRX1Q86UT6 975 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms