RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SEC63Q9UGP8 760 aaKnown RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 FBXO2Q9UK22 296 aaPredicted RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 PCDHA4Q9UN74 947 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 HPSEQ9Y251 543 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 FAM196BA6NMK8 535 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 BMP15O95972 392 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 HNRNPCP07910 306 aaKnown RBP eCLIP13.55□□□□□ -0.24
DDX55-206ENST00000539934 PDHBP11177 359 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 STIM1Q13586 685 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 CRY1Q16526 586 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 TTC38Q5R3I4 469 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 RRP36Q96EU6 259 aaKnown RBP13.55□□□□□ -0.24
DDX55-206ENST00000539934 DEFB118Q96PH6 123 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 ATAD3AQ9NVI7 634 aa13.55□□□□□ -0.24
DDX55-206ENST00000539934 FRMPD2Q68DX3 1309 aaPredicted RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 C2orf81A6NN90 581 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 PFDN1O60925 122 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 ALDH2P05091 517 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 ETV3P41162 512 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 BASP1P80723 227 aaKnown RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 PPIL2Q13356 520 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 PTPROQ16827 1216 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 PDXDC1Q6P996 788 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 CYB5D1Q6P9G0 228 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 DPH6Q7L8W6 267 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 SRGAP1Q7Z6B7 1085 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 CCHCR1Q8TD31 782 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 ANKRD27Q96NW4 1050 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 VAT1LQ9HCJ6 419 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 INIPQ9NRY2 104 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 BARHL2Q9NY43 387 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 TMOD2Q9NZR1 351 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 MTUS1Q9ULD2 1270 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 CCPG1Q9ULG6 757 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 ZMYND8Q9ULU4 1186 aaPredicted RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 C2CD2Q9Y426 696 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 FAM237AA0A1B0GTK4 181 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 TFRCP02786 760 aaKnown RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 SYN1P17600 705 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 NFKBIAP25963 317 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 GEMIN4P57678 1058 aaKnown RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 BYSLQ13895 437 aaKnown RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 CERKLQ49MI3 558 aaPredicted RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 TYW1BQ6NUM6 668 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 BEND5Q7L4P6 421 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 NLRP9Q7RTR0 991 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 ZNF554Q86TJ5 538 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 ERICH1Q86X53 443 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 HELQQ8TDG4 1101 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 CCDC12Q8WUD4 166 aaPredicted RBP13.54□□□□□ -0.24
DDX55-206ENST00000539934 GBP3Q9H0R5 595 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 DNAJC18Q9H819 358 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 STIM2Q9P246 746 aa13.54□□□□□ -0.24
DDX55-206ENST00000539934 DOCK3Q8IZD9 2030 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 LRRD1A4D1F6 860 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 B4GALT4O60513 344 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 ENTPD3O75355 529 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 COL6A1P12109 1028 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 TRAPPC10P48553 1259 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 NAPAP54920 295 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 GRIN1Q05586 938 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 LRMPQ12912 555 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 PAK2Q13177 524 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 LAPTM5Q13571 262 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 DPYSQ14117 519 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 ZNF174Q15697 407 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 SH3BP5LQ7L8J4 393 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 FOXP4Q8IVH2 680 aaPredicted RBP13.53□□□□□ -0.24
DDX55-206ENST00000539934 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
DDX55-206ENST00000539934 RASSF8Q8NHQ8 419 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 PAWRQ96IZ0 340 aaKnown RBP13.53□□□□□ -0.24
DDX55-206ENST00000539934 NDNQ99608 321 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 ACTR5Q9H9F9 607 aaPredicted RBP13.53□□□□□ -0.24
DDX55-206ENST00000539934 GGA2Q9UJY4 613 aa13.53□□□□□ -0.24
DDX55-206ENST00000539934 AP5Z1O43299 807 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 FBXO21O94952 628 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 SGPL1O95470 568 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 GNRH1P01148 92 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 FLT3LGP49771 235 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 NLRP12P59046 1061 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 MOGSQ13724 837 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 SGSM1Q2NKQ1 1148 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 DEFB123Q8N688 67 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 TRIML2Q8N7C3 387 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 TBC1D20Q96BZ9 403 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 PIGSQ96S52 555 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 DNAI2Q9GZS0 605 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 KIAA1257Q9ULG3 409 aa13.52□□□□□ -0.24
DDX55-206ENST00000539934 A0A087WWV3 80 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms