RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 MSX2P35548 267 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 STT3AP46977 705 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 GJA8P48165 433 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 SLC34A1Q06495 639 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 MESDQ14696 234 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 C2CD6Q53TS8 623 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 DUPD1Q68J44 220 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 TAOK1Q7L7X3 1001 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CATIPQ7Z7H3 387 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC84Q86UT8 332 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 TMCO5AQ8N6Q1 288 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 RBM46Q8TBY0 533 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 MIPOL1Q8TD10 442 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 FBXO41Q8TF61 875 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 NAT14Q8WUY8 206 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 LENG1Q96BZ8 264 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 PGM2Q96G03 612 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 DHTKD1Q96HY7 919 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 HEY2Q9UBP5 337 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 PPM1HQ9ULR3 514 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 PAIP2BQ9ULR5 123 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 PXDNLA1KZ92 1463 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 A0A1W2PPM1 405 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 A0A1W2PQ67 120 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 BICDL2A1A5D9 508 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 A8MU76 341 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 PIK3R2O00459 728 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 DDX3XO00571 662 aaKnown RBP eCLIP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 CLIC2O15247 247 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 CYP2D6P10635 497 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 RPA3P35244 121 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 GJC1P36383 396 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 BCAMP50895 628 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 CASP7P55210 303 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 DLG1Q12959 904 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 PPP6R3Q5H9R7 873 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC137Q6PK04 289 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 NCCRP1Q6ZVX7 275 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 EPM2AIP1Q7L775 607 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 NT5DC3Q86UY8 548 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 NBPF15Q8N660 670 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 C4orf32Q8N8J7 132 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 LRRC57Q8N9N7 239 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 RDH13Q8NBN7 331 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 C1orf131Q8NDD1 294 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ZNF184Q99676 751 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 HEMGNQ9BXL5 484 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 MIS12Q9H081 205 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ASCC2Q9H1I8 757 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 GREM2Q9H772 168 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ZNF395Q9H8N7 513 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 LRP2BPQ9P2M1 347 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 MARCOQ9UEW3 520 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ASIC3Q9UHC3 531 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 AMFRQ9UKV5 643 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 BARX2Q9UMQ3 279 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 E7ENQ6 273 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 MAPK13O15264 365 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 LCA5LO95447 670 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ZFYP08048 801 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 KRT15P19012 456 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 MLH1P40692 756 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ARFIP2P53365 341 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 EIF3BP55884 814 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 DMPKQ09013 629 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 PEX6Q13608 980 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 NLRP9Q7RTR0 991 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 LRRC6Q86X45 466 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ANKLE2Q86XL3 938 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ZSCAN29Q8IWY8 852 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ANKRD27Q96NW4 1050 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 NAP1L3Q99457 506 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 THTPAQ9BU02 230 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 STK33Q9BYT3 514 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 IQCGQ9H095 443 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 LRMDAQ9H2I8 198 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 KBTBD4Q9NVX7 518 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 PASKQ96RG2 1323 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ABCA9Q8IUA7 1624 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 A0A1W2PQJ5 194 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 A6NL46 340 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 GOLGA8SH3BPF8 625 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 GOLGA8MH3BSY2 632 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 THAP12O43422 761 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 TMCC1O94876 653 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 ENO1P06733 434 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 HNRNPH3P31942 346 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 NAA20P61599 178 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 KIF22Q14807 665 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 MTFR1Q15390 333 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 SLC1A5Q15758 541 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 RASSF3Q86WH2 238 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 SLC15A3Q8IY34 581 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 GBP7Q8N8V2 638 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 GABPB2Q8TAK5 448 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 TGFBRAP1Q8WUH2 860 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 TNFRSF25Q93038 417 aa7.75□□□□□ -1.17
LIMCH1-207ENST00000508466 SLC35B4Q969S0 331 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms