RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 DMRT3Q9NQL9 472 aa6.45□□□□□ -1.38
HMGB1P38-201ENST00000490557 FAM171A2A8MVW0 826 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PCDHGA12O60330 932 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 RAD17O75943 681 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 MSX2P35548 267 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 CASRP41180 1078 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 MCAMP43121 646 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 EPHB1P54762 984 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 KIF23Q02241 960 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 SAFB2Q14151 953 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 LILRA6Q6PI73 481 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 FAM111BQ6SJ93 734 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 MIGA2Q7L4E1 593 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 THEMISQ8N1K5 641 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 MIER2Q8N344 545 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 HOOK2Q96ED9 719 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 CSRNP2Q9H175 543 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 DEF6Q9H4E7 631 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PLA2G3Q9NZ20 509 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PCDHGA9Q9Y5G4 932 aaKnown RBP6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PCDHGA8Q9Y5G5 932 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PCDHGA7Q9Y5G6 932 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PCDHGA6Q9Y5G7 932 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 PCDHGA3Q9Y5H0 932 aa6.44□□□□□ -1.38
HMGB1P38-201ENST00000490557 E2F8A0AVK6 867 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 FZD9O00144 591 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 GPR42O15529 346 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 FOXD2O60548 495 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 ITGA10O75578 1167 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 ENDOD1O94919 500 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 IL33O95760 270 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 GASTP01350 101 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 C5AR1P21730 350 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 UAP1L1Q3KQV9 507 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 POLNQ7Z5Q5 900 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 ADGRE4PQ86SQ3 457 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 FUKQ8N0W3 1084 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 D2HGDHQ8N465 521 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 JDP2Q8WYK2 163 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 C7orf25Q9BPX7 421 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 GPRC5DQ9NZD1 345 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 IP6K2Q9UHH9 426 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 TCEAL9Q9UHQ7 104 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 INTUQ9ULD6 942 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 HDAC5Q9UQL6 1122 aa6.43□□□□□ -1.38
HMGB1P38-201ENST00000490557 FOXS1O43638 330 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 GNAT2P19087 354 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 COMTP21964 271 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 CRHR1P34998 444 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 PTPN7P35236 360 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 ADAM8P78325 824 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 MST1LQ2TV78 715 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 FKBP15Q5T1M5 1219 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 MFSD5Q6N075 450 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 PQLC1Q8N2U9 271 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 NRG4Q8WWG1 115 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 IL17RAQ96F46 866 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 SAMD11Q96NU1 681 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 SENP6Q9GZR1 1112 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 AGO3Q9H9G7 860 aaKnown RBP6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 CNOT11Q9UKZ1 510 aaKnown RBP6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 TCAF1Q9Y4C2 921 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 SLC30A1Q9Y6M5 507 aa6.42□□□□□ -1.38
HMGB1P38-201ENST00000490557 ZNF623O75123 536 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 VCAM1P19320 739 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 GZMKP49863 264 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 ADKP55263 362 aaKnown RBP6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 MCL1Q07820 350 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 MGAT2Q10469 447 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 PIN1Q13526 163 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 ODF1Q14990 250 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 SGMS1Q86VZ5 419 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 CPA6Q8N4T0 437 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 HDAC10Q969S8 669 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 HSPBAP1Q96EW2 488 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 FAM89AQ96GI7 184 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 RBM15Q96T37 977 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 MPHOSPH9Q99550 1183 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 MANSC1Q9H8J5 431 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 BCO1Q9HAY6 547 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 SCOCQ9UIL1 159 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 TUBD1Q9UJT1 453 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 ZNF180Q9UJW8 692 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 G3BP2Q9UN86 482 aaKnown RBP6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 GIT1Q9Y2X7 761 aa6.41□□□□□ -1.38
HMGB1P38-201ENST00000490557 BTBD11A6QL63 1104 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 PATE3B3GLJ2 98 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 DTNBO60941 627 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 MFAP3LO75121 409 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 RPLP2P05387 115 aaKnown RBP6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 APBA1Q02410 837 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 PPP3CAQ08209 521 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 FOXL1Q12952 345 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 TMEM240Q5SV17 173 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 RHOT1Q8IXI2 618 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 OR7D4Q8NG98 312 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 MDM1Q8TC05 714 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 DPF2Q92785 391 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 ZNF512Q96ME7 567 aaPredicted RBP6.4□□□□□ -1.38
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