RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 RXFP1Q9HBX9 757 aa8.6□□□□□ -1.03
PDPN-205ENST00000487038 LTB4R2Q9NPC1 389 aa8.6□□□□□ -1.03
PDPN-205ENST00000487038 DISC1Q9NRI5 854 aa8.6□□□□□ -1.03
PDPN-205ENST00000487038 AGPAT5Q9NUQ2 364 aa8.6□□□□□ -1.03
PDPN-205ENST00000487038 BARHL2Q9NY43 387 aa8.6□□□□□ -1.03
PDPN-205ENST00000487038 ANGPTL2Q9UKU9 493 aa8.6□□□□□ -1.03
PDPN-205ENST00000487038 MRPS17Q9Y2R5 130 aaKnown RBP8.6□□□□□ -1.03
PDPN-205ENST00000487038 PRG3Q9Y2Y8 225 aaPredicted RBP8.6□□□□□ -1.03
PDPN-205ENST00000487038 PCDHB2Q9Y5E7 798 aa8.6□□□□□ -1.03
PDPN-205ENST00000487038 FAM170BA6NMN3 283 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 MEIS3P2A8K0S8 358 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 SLC30A4O14863 429 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 TGM5O43548 720 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 GAS2O43903 313 aaKnown RBP8.59□□□□□ -1.03
PDPN-205ENST00000487038 POMCP01189 267 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 MYBP10242 640 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 RPS9P46781 194 aaKnown RBP8.59□□□□□ -1.03
PDPN-205ENST00000487038 GPC5P78333 572 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 DSG1Q02413 1049 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 SLC44A4Q53GD3 710 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 PRR16Q569H4 304 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 LIN9Q5TKA1 542 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 JAKMIP3Q5VZ66 844 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 TYW1BQ6NUM6 668 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 PALB2Q86YC2 1186 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 RAB11FIP4Q86YS3 637 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 REXO1Q8N1G1 1221 aaKnown RBP8.59□□□□□ -1.03
PDPN-205ENST00000487038 NELL1Q92832 810 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 NLRP4Q96MN2 994 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 IER2Q9BTL4 223 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 PHF20Q9BVI0 1012 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 TEKT3Q9BXF9 490 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 PRMT8Q9NR22 394 aaPredicted RBP8.59□□□□□ -1.03
PDPN-205ENST00000487038 MARCH5Q9NX47 278 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 CDH7Q9ULB5 785 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 TAF6LQ9Y6J9 622 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 COL4A2P08572 1712 aa8.59□□□□□ -1.03
PDPN-205ENST00000487038 GCN1Q92616 2671 aaKnown RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 FLNBO75369 2602 aaKnown RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 DSPP15924 2871 aaKnown RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 CHMP2AO43633 222 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 ZNF862O60290 1169 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 B4GALT3O60512 393 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 GAS7O60861 476 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 XYLBO75191 536 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 ZMYND10O75800 440 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 SPATA31D3P0C874 917 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 KCNA4P22459 653 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 DRP2Q13474 957 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 RTN1Q16799 776 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 USP41Q3LFD5 358 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 XKR3Q5GH77 459 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 PARM1Q6UWI2 310 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 ZNF852Q6ZMS4 543 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 AGMOQ6ZNB7 445 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 SPATA31D4Q6ZUB0 917 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 TPRG1Q6ZUI0 275 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 SGMS1Q86VZ5 419 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 GPR65Q8IYL9 337 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 HACE1Q8IYU2 909 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 RNF168Q8IYW5 571 aaPredicted RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 CELF5Q8N6W0 485 aaKnown RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 RDM1Q8NG50 284 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 CRYGNQ8WXF5 182 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 MAP4K1Q92918 833 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 COLEC11Q9BWP8 271 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 C6orf50Q9HD87 102 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 FNIP2Q9P278 1114 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 SUCLA2Q9P2R7 463 aaPredicted RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 RBM8AQ9Y5S9 174 aaKnown RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.58□□□□□ -1.04
PDPN-205ENST00000487038 DOCK6Q96HP0 2047 aa8.58□□□□□ -1.04
PDPN-205ENST00000487038 SPEGQ15772 3267 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 VWA8A3KMH1 1905 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 ESYT2A0FGR8 921 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 SGSM2O43147 1006 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 MAFO75444 373 aaPredicted RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 ERLIN2O94905 339 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 RETP07949 1114 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 HNRNPA1P09651 372 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDPN-205ENST00000487038 ITGA4P13612 1032 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 TGM1P22735 817 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 TARSP26639 723 aaKnown RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 GNA11P29992 359 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 ADCY1Q08828 1119 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 TARBP2Q15633 366 aaKnown RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 UGCGQ16739 394 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 PPM1LQ5SGD2 360 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 TTC22Q5TAA0 569 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 LRCH2Q5VUJ6 765 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 DIEXFQ68CQ4 756 aaKnown RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 IL31Q6EBC2 164 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 FUT10Q6P4F1 479 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 APOA5Q6Q788 366 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 TSSK4Q6SA08 328 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 PRR23CQ6ZRP0 262 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 PRR23BQ6ZRT6 265 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms