RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 BTBD18B2RXH4 712 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ALDH2P05091 517 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SERPING1P05155 500 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ASGR1P07306 291 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 PLS3P13797 630 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 LAG3P18627 525 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 GCKP35557 465 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ADD1P35611 737 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TERF1P54274 439 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 IRF5Q13568 498 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RPS6KA2Q15349 733 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RRAGAQ7L523 313 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CTU1Q7Z7A3 348 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 GUF1Q8N442 669 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 BSNDQ8WZ55 320 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 KLC2Q9H0B6 622 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 PLEKHA5Q9HAU0 1116 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CYP3A43Q9HB55 503 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TRPM5Q9NZQ8 1165 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 BCCIPQ9P287 314 aaKnown RBP eCLIP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 IP6K2Q9UHH9 426 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 POLR1AO95602 1720 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 A8MXQ7 604 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 MEIS1O00470 390 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 NOL3O60936 208 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TJP3O95049 919 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TM4SF1P30408 202 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SLC1A1P43005 524 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RENBPP51606 427 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ATXN3P54252 364 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 FAM193AP78312 1265 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CENPCQ03188 943 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 EMC2Q15006 297 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 PI16Q6UXB8 463 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 NSUN7Q8NE18 718 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 AFG1LQ8WV93 481 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ASIC4Q96FT7 647 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 DCUN1D1Q96GG9 259 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SYT17Q9BSW7 474 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TEX12Q9BXU0 123 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 FAM129AQ9BZQ8 928 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 VPS16Q9H269 839 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 BHMT2Q9H2M3 363 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 FBXO44Q9H4M3 255 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 PPCSQ9HAB8 311 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SP110Q9HB58 689 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 NCOA5Q9HCD5 579 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SLC25A13Q9UJS0 675 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 BAG5Q9UL15 447 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 PCDHB6Q9Y5E3 794 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF142P52746 1687 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 BRD1O95696 1058 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ATF2P15336 505 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 MARK3P27448 753 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RASSF2P50749 326 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ERVK-9P63128 1117 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ERVK-24P63145 666 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TXNRD3Q86VQ6 643 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CEP57Q86XR8 500 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 UNC45BQ8IWX7 931 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 MB21D2Q8IYB1 491 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ANKRD13CQ8N6S4 541 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CEP120Q8N960 986 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ENOX1Q8TC92 643 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SLC20A1Q8WUM9 679 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 GJA10Q969M2 543 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CNOT6LQ96LI5 555 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 C16orf45Q96MC5 204 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RIPOR3Q96MK2 946 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF558Q96NG5 402 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ZWILCHQ9H900 591 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 KCTD5Q9NXV2 234 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RBAKQ9NYW8 714 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 GUCA1BQ9UMX6 200 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ADAMTSL3P82987 1691 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CLUHO75153 1309 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 THPOP40225 353 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 KCNQ4P56696 695 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 KNOP1Q1ED39 458 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 LONRF2Q1L5Z9 754 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SAMD7Q7Z3H4 446 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TMEM86AQ8N2M4 240 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 PGBD3Q8N328 593 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 FIBCD1Q8N539 461 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ENAHQ8N8S7 591 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RDH13Q8NBN7 331 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 LEMD2Q8NC56 503 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SPDYE1Q8NFV5 336 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 HSPH1Q92598 858 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF653Q96CK0 615 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 CAPNS2Q96L46 248 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SENP7Q9BQF6 1050 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 EIF2AK1Q9BQI3 630 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.93□□□□□ -1.621e-6■□□□□ 10.3
CCNL1-215ENST00000474539 NXF1Q9UBU9 619 aaKnown RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 TUBE1Q9UJT0 475 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 SLC13A4Q9UKG4 626 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 RCOR1Q9UKL0 485 aa4.93□□□□□ -1.62
CCNL1-215ENST00000474539 MORC2Q9Y6X9 1032 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-215ENST00000474539 NRCAMQ92823 1304 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms