RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TMEM179Q6ZVK1 233 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 UNC13DQ70J99 1090 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 CCDC84Q86UT8 332 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 CEP112Q8N8E3 955 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 GIMAP8Q8ND71 665 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 OR8K1Q8NGG5 319 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 STAMQ92783 540 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 GOLGA1Q92805 767 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 FRMD6Q96NE9 622 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 TSGA10Q9BZW7 698 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 UBA5Q9GZZ9 404 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 VPS16Q9H269 839 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 PSTPIP2Q9H939 334 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 LUC7LQ9NQ29 371 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 INTS13Q9NVM9 706 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 OGFRQ9NZT2 677 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 NYAP2Q9P242 653 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 DDX25Q9UHL0 483 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 HDAC9Q9UKV0 1011 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
ATPAF1-204ENST00000474020 ABCB11O95342 1321 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 IGKV6D-41A0A0C4DH26 115 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ECE2O60344 883 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ENTPD3O75355 529 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 FBXO24O75426 580 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 PAGE1O75459 146 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ERLIN1O75477 346 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 GNA14O95837 355 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 FAM87AP0C7U9 286 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 CASP1P29466 404 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 KRT9P35527 623 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 EIF6P56537 245 aaKnown RBP6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ICA1Q05084 483 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 GPS2Q13227 327 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 BMS1Q14692 1282 aaKnown RBP6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 SPA17Q15506 151 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ELF2Q15723 593 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 IL17AQ16552 155 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 SLFN13Q68D06 897 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 SCARA3Q6AZY7 606 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 CCDC70Q6NSX1 233 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 FOXR2Q6PJQ5 311 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 MOXD1Q6UVY6 613 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 TMCO3Q6UWJ1 677 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 TOGARAM2Q6ZUX3 1019 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 KIAA1328Q86T90 577 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 REXO1L1PQ8IX06 675 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 CCDC65Q8IXS2 484 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ADGRF4Q8IZF3 695 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 KRT222Q8N1A0 295 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 MB21D1Q8N884 522 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 LARP4BQ92615 738 aaKnown RBP6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 RAD54LQ92698 747 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ISL2Q96A47 359 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 PLIN2Q99541 437 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 AMNQ9BXJ7 453 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 IDI2Q9BXS1 227 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 TRIM9Q9C026 710 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 GBP3Q9H0R5 595 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 TMEM60Q9H2L4 133 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 SH2D4AQ9H788 454 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ABHD10Q9NUJ1 306 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 STK32BQ9NY57 414 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 ADGRE2Q9UHX3 823 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 GDAQ9Y2T3 454 aa6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 DDX60LQ5H9U9 1706 aaKnown RBP6.5□□□□□ -1.37
ATPAF1-204ENST00000474020 PP2D1A8MPX8 630 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 TBX3O15119 743 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 TEX33O43247 280 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 KRT86O43790 486 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 USO1O60763 962 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 IDEP14735 1019 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 MCM3P25205 808 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 CDC25AP30304 524 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 SHMT1P34896 483 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 PBX1P40424 430 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 EPS15P42566 896 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 CKAP4Q07065 602 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 GOLGA8FQ08AF8 430 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 GOLGA8DPQ0D2H9 430 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 COL19A1Q14993 1142 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 LRRC14Q15048 493 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 CDC37Q16543 378 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 WHAMMP3Q1A5X7 153 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 ABCB5Q2M3G0 1257 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 ZNF569Q5MCW4 686 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 LLGL2Q6P1M3 1020 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 ARHGAP27Q6ZUM4 889 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 RASGRP2Q7LDG7 609 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 COL23A1Q86Y22 540 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 TMEM139Q8IV31 216 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 KIAA0825Q8IV33 1275 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 SMAP1Q8IYB5 467 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 CCDC170Q8IYT3 715 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 GUF1Q8N442 669 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms