RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NACADO15069 1562 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 RSF1Q96T23 1441 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 C2orf78A6NCI8 922 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 MTSS1O43312 755 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 CTNND1O60716 968 aaKnown RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 ALDH1A2O94788 518 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 ENDOD1O94919 500 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 KRT18P05783 430 aaKnown RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 ZNF888P0CJ79 500 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 ECHS1P30084 290 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 KIR2DL3P43628 341 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 RRADP55042 308 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 MST1LQ2TV78 715 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 PGS1Q32NB8 556 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 XP32Q5T750 250 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 AGBL4Q5VU57 503 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 PPP4R3AQ6IN85 833 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 SLC4A10Q6U841 1118 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 ABHD15Q6UXT9 468 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 ZNF761Q86XN6 746 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 CCAR1Q8IX12 1150 aaKnown RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 TP53I13Q8NBR0 393 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 OR2I1PQ8NGU4 316 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 DIS3LQ8TF46 1054 aaKnown RBP5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 MBD6Q96DN6 1003 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 ZDHHC9Q9Y397 364 aa5.59□□□□□ -1.51
HMGB1P16-201ENST00000447155 TNIKQ9UKE5 1360 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 MROH6A6NGR9 719 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 RPLP2P05387 115 aaKnown RBP5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 ADSLP30566 484 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 SEPT2Q15019 361 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 C3orf36Q3SXR2 165 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 USP30Q70CQ3 517 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 GPR155Q7Z3F1 870 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 ZNF480Q8WV37 535 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 FAM193BQ96PV7 902 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 FMNL2Q96PY5 1086 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 SLC6A15Q9H2J7 730 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 MANSC1Q9H8J5 431 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 BCO1Q9HAY6 547 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 JADE2Q9NQC1 790 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 PTPN22Q9Y2R2 807 aa5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 RBM8AQ9Y5S9 174 aaKnown RBP5.58□□□□□ -1.52
HMGB1P16-201ENST00000447155 FRMPD2Q68DX3 1309 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 H3BML4 177 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 SGTAO43765 313 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 NUAK1O60285 661 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 GASTP01350 101 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 MYL1P05976 194 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 FXR1P51114 621 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 IL10RAQ13651 578 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 NFYCQ13952 458 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 GRM3Q14832 879 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 ZNF568Q3ZCX4 644 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 GAGE13Q4V321 117 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 TCERG1LQ5VWI1 586 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 CIAPIN1Q6FI81 312 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 FAM124AQ86V42 546 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 DENND1CQ8IV53 801 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 MSL3Q8N5Y2 521 aaKnown RBP5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 ZBTB34Q8NCN2 500 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 OR7D4Q8NG98 312 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 ACO2Q99798 780 aaKnown RBP5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 ARNT2Q9HBZ2 717 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 TLR9Q9NR96 1032 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 ING3Q9NXR8 418 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 DDX20Q9UHI6 824 aaKnown RBP5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 PCDHA13Q9Y5I0 950 aa5.57□□□□□ -1.52
HMGB1P16-201ENST00000447155 SCRIBQ14160 1630 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 ARHGAP6O43182 974 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 TOX4O94842 621 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 JUNP05412 331 aaKnown RBP5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 VSIG10L2P0DP72 767 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 CRHR1P34998 444 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 IL12RB1P42701 662 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 ADCY7P51828 1080 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 SLURP1P55000 103 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 BPIFB4P59827 614 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 PURAQ00577 322 aaKnown RBP5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 CDC42EP1Q00587 391 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 HGFACQ04756 655 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 KIAA2012Q0VF49 1180 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 VMACQ2NL98 169 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 THEMIS2Q5TEJ8 643 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 Q6ZVL8 140 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 TTC7BQ86TV6 843 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 RHOT1Q8IXI2 618 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 KBTBD2Q8IY47 623 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 CAMKK1Q8N5S9 505 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 KAT5Q92993 513 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 CYFIP2Q96F07 1278 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 FAM204AQ9H8W3 233 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 MAN1C1Q9NR34 630 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 SLC52A1Q9NWF4 448 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 TRPS1Q9UHF7 1281 aa5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 BAZ1BQ9UIG0 1483 aaKnown RBP5.56□□□□□ -1.52
HMGB1P16-201ENST00000447155 ADAMTS20P59510 1910 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms