RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FGFR2P21802 821 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 PON1P27169 355 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 IL6STP40189 918 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 CPA2P48052 419 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 KCNA1Q09470 495 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 USP17L2Q6R6M4 530 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 C4orf33Q8N1A6 199 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 LNX1Q8TBB1 728 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 CKAP2Q8WWK9 683 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 PRR11Q96HE9 360 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 DNAAF2Q9NVR5 837 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 TBX10O75333 385 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 GNA14O95837 355 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 TAC1P20366 129 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 CYP4F22Q6NT55 531 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 SCYL3Q8IZE3 742 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 ATG4AQ8WYN0 398 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MIPEPQ99797 713 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MCM9Q9NXL9 1143 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MTRF1LQ9UGC7 380 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 A6NJR5 290 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 CES2O00748 559 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MESDQ14696 234 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 NONOQ15233 471 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 CALCRLQ16602 461 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MTDHQ86UE4 582 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 WDR60Q8WVS4 1066 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 ZNF512BQ96KM6 892 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 TRAPPC9Q96Q05 1148 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 ACP6Q9NPH0 428 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 CFAP69A5D8W1 941 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 SFI1A8K8P3 1242 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 BAG3O95817 575 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 KRT18P05783 430 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 DLATP10515 647 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 RXRBP28702 533 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 ABCD1P33897 745 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MTMR2Q13614 643 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 TMED2Q15363 201 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 PABPC1LQ4VXU2 614 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 PHLDB2Q86SQ0 1253 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 SNRNP27Q8WVK2 155 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 SCFD1Q8WVM8 642 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 COA7Q96BR5 231 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 PHTF1Q9UMS5 762 aa12.09□□□□□ -0.47
SEC61A1-202ENST00000424880 MYH14Q7Z406 1995 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 MEIS1O00470 390 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 FUT4P22083 530 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 PSMC4P43686 418 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 WDR4P57081 412 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 PPP2R5CQ13362 524 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 MYBPC3Q14896 1274 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ACSBG2Q5FVE4 666 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 OLFML2BQ68BL8 750 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ZNF34Q8IZ26 560 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 MKNK1Q9BUB5 465 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 MMADHCQ9H3L0 296 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 NPHS2Q9NP85 383 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 TXLNGQ9NUQ3 528 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.08□□□□□ -0.488e-6■□□□□ 9.8
SEC61A1-202ENST00000424880 GCNT4Q9P109 453 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 MAD2L2Q9UI95 211 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 STK10O94804 968 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 GYS1P13807 737 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 PTGIRP43119 386 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 USP46P62068 366 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 CNPY1Q3B7I2 92 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 SMIM5Q71RC9 77 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 RAD54LQ92698 747 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 SYN2Q92777 582 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 TUBGCP5Q96RT8 1024 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ZWILCHQ9H900 591 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ASIC3Q9UHC3 531 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 GRID1Q9ULK0 1009 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ZNF232Q9UNY5 417 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ALG6Q9Y672 507 aa12.08□□□□□ -0.48
SEC61A1-202ENST00000424880 ERVV-1B6SEH8 477 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 CREB3O43889 395 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 PYGMP11217 842 aa12.07□□□□□ -0.48
SEC61A1-202ENST00000424880 ACADSP16219 412 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms