RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 BARX2Q9UMQ3 279 aaPredicted RBP15.21■□□□□ 0.03
CXCL12-205ENST00000395794 HIDE1A8MVS5 230 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 CD2BP2O95400 341 aaKnown RBP15.2■□□□□ 0.02
CXCL12-205ENST00000395794 EYA4O95677 639 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 NAMPTP43490 491 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 ZP2Q05996 745 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 MAPK6Q16659 721 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 LLGL2Q6P1M3 1020 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 DDX53Q86TM3 631 aaKnown RBP15.2■□□□□ 0.02
CXCL12-205ENST00000395794 ZNF280BQ86YH2 543 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 VPS52Q8N1B4 723 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 SMG8Q8ND04 991 aaKnown RBP15.2■□□□□ 0.02
CXCL12-205ENST00000395794 KIFAP3Q92845 792 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 TMEM175Q9BSA9 504 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.2■□□□□ 0.02
CXCL12-205ENST00000395794 DNAJB4Q9UDY4 337 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 FAN1Q9Y2M0 1017 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 GIT1Q9Y2X7 761 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 ARID2Q68CP9 1835 aa15.2■□□□□ 0.02
CXCL12-205ENST00000395794 A0A1B0GUA9 196 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-205ENST00000395794 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 B4GALT5O43286 388 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 NPTXRO95502 500 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 GLP2RO95838 553 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 ALADP13716 330 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 LIG1P18858 919 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 SLC11A1P49279 550 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 EFNA5P52803 228 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
CXCL12-205ENST00000395794 ZRSR1Q15695 479 aaKnown RBP15.19■□□□□ 0.02
CXCL12-205ENST00000395794 AMHR2Q16671 573 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 CDCA2Q69YH5 1023 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-205ENST00000395794 SMRP1Q8NCR6 262 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 CASP10Q92851 521 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 GAD1Q99259 594 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 CD320Q9NPF0 282 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-205ENST00000395794 HES2Q9Y543 173 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 BDP1A6H8Y1 2624 aa15.19■□□□□ 0.02
CXCL12-205ENST00000395794 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 N4BP3O15049 544 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 DDHD2O94830 711 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 CTSAP10619 480 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 HOXB8P17481 243 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-205ENST00000395794 MLH1P40692 756 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 OR1G1P47890 313 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 ECM1Q16610 540 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 FAM187BQ17R55 369 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 TPRNQ4KMQ1 711 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 TMEM184AQ6ZMB5 413 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 APBB1IPQ7Z5R6 666 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-205ENST00000395794 CDK5RAP3Q96JB5 506 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 ADPGKQ9BRR6 497 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 ZBP1Q9H171 429 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 FZD8Q9H461 694 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
CXCL12-205ENST00000395794 EPHX3Q9H6B9 360 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 PARP2Q9UGN5 583 aa15.18■□□□□ 0.02
CXCL12-205ENST00000395794 USP15Q9Y4E8 981 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-205ENST00000395794 PP2D1A8MPX8 630 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 PI4K2BG5E9Z4 385 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 ACKR2O00590 384 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 NRP1O14786 923 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 PRKCBP05771 671 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 PDCP20941 246 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 AKAP5P24588 427 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 AFF1P51825 1210 aaKnown RBP15.17■□□□□ 0.02
CXCL12-205ENST00000395794 RBM10P98175 930 aaKnown RBP15.17■□□□□ 0.02
CXCL12-205ENST00000395794 ATP2C1P98194 919 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-205ENST00000395794 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
CXCL12-205ENST00000395794 ANKRD54Q6NXT1 300 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 TMEM173Q86WV6 379 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-205ENST00000395794 CDR2LQ86X02 465 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-205ENST00000395794 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 VN1R2Q8NFZ6 395 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 BSNDQ8WZ55 320 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 DRC1Q96MC2 740 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 RPS6KC1Q96S38 1066 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 COLEC11Q9BWP8 271 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 EMILIN2Q9BXX0 1053 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 NT5C3AQ9H0P0 336 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 MUC3AQ02505 3323 aa15.17■□□□□ 0.02
CXCL12-205ENST00000395794 VWA3AA6NCI4 1184 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 CCDC169A6NNP5 214 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 E9PMD0 336 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 K7ERI5 159 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 INPPL1O15357 1258 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 CLASP2O75122 1294 aaKnown RBP15.16■□□□□ 0.02
CXCL12-205ENST00000395794 BMP15O95972 392 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 SSBP05455 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
CXCL12-205ENST00000395794 CDC25AP30304 524 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 SCNN1GP51170 649 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 IL17AQ16552 155 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 TMEM31Q5JXX7 168 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
CXCL12-205ENST00000395794 BRAPQ7Z569 592 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms