RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 GOLGA6CA6NDK9 693 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 GOLGA6DP0CG33 693 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 ABCB4P21439 1286 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 NOP2P46087 812 aaKnown RBP16.65■□□□□ 0.26
CPSF7-202ENST00000394888 PTENP60484 403 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 TMEM132BQ14DG7 1078 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 ZNF568Q3ZCX4 644 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 TAF3Q5VWG9 929 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 XXYLT1Q8NBI6 393 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 KCNN1Q92952 543 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 GOLGA6AQ9NYA3 693 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 GOLGA8KD6RF30 607 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 PAK2Q13177 524 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 ZNF746Q6NUN9 644 aaPredicted RBP16.65■□□□□ 0.26
CPSF7-202ENST00000394888 MCF2L2Q86YR7 1114 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 SAMD3Q8N6K7 520 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 ZKSCAN4Q969J2 545 aaPredicted RBP16.65■□□□□ 0.26
CPSF7-202ENST00000394888 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 ATMINO43313 823 aaPredicted RBP16.65■□□□□ 0.26
CPSF7-202ENST00000394888 PSMC5P62195 406 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 ALCAMQ13740 583 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 C11orf63Q6NUN7 778 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 SAAL1Q96ER3 474 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 ANKEF1Q9NU02 776 aa16.65■□□□□ 0.26
CPSF7-202ENST00000394888 CENPFP49454 3210 aa16.64■□□□□ 0.26
CPSF7-202ENST00000394888 MMEP08473 750 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 PTPRAP18433 802 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 GPC3P51654 580 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 ZNF844Q08AG5 666 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 BAATQ14032 418 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-202ENST00000394888 SNRNP35Q16560 246 aaKnown RBP16.64■□□□□ 0.25
CPSF7-202ENST00000394888 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 DUPD1Q68J44 220 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 OR2W6PQ8NHA6 318 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 WHAMMQ8TF30 809 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 TRIM51Q9BSJ1 452 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 ACBD3Q9H3P7 528 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 LARSQ9P2J5 1176 aaKnown RBP16.64■□□□□ 0.25
CPSF7-202ENST00000394888 TMC3Q7Z5M5 1100 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 CCDC60Q8IWA6 550 aaPredicted RBP16.64■□□□□ 0.25
CPSF7-202ENST00000394888 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
CPSF7-202ENST00000394888 MYO1FO00160 1098 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 DAPK3O43293 454 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 HERPUD2Q9BSE4 406 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 MOV10L1Q9BXT6 1211 aaKnown RBP16.64■□□□□ 0.25
CPSF7-202ENST00000394888 CARD9Q9H257 536 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 TMBIM4Q9HC24 238 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 GRHL1Q9NZI5 618 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 ALG6Q9Y672 507 aa16.64■□□□□ 0.25
CPSF7-202ENST00000394888 DCDC2CA8MYV0 355 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 FZD9O00144 591 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 TRIM66O15016 1216 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 CTNNA2P26232 953 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 CNGA1P29973 690 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 BACE1P56817 501 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 ZNF211Q13398 564 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 CRELD2Q6UXH1 353 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 DHX38Q92620 1227 aaKnown RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 RNPC3Q96LT9 517 aaKnown RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 EIF3HO15372 352 aaKnown RBP eCLIP16.63■□□□□ 0.254e-10■□□□□ 9.1
CPSF7-202ENST00000394888 ITGBL1O95965 494 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 FGGP02679 453 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 FTLP02792 175 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 PRELID2Q8N945 189 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 TAS1R2Q8TE23 839 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 PSPC1Q8WXF1 523 aaKnown RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 ZNF541Q9H0D2 1346 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 CYP1A2P05177 515 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 SNRPFP62306 86 aaKnown RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 TTC19Q6DKK2 380 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-202ENST00000394888 ABHD15Q6UXT9 468 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 FAM76AQ8TAV0 307 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 BTBD6Q96KE9 485 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 R3HDMLQ9H3Y0 253 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 SLITRK6Q9H5Y7 841 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.255e-7■■■■■ 44.9
CPSF7-202ENST00000394888 ARHGAP28Q9P2N2 729 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 PLAAQ9Y263 795 aa16.63■□□□□ 0.25
CPSF7-202ENST00000394888 WDR64B1ANS9 1081 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 CCDC188H7C350 402 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 PEX10O60683 326 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 TNNC1P63316 161 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 KCTD16Q68DU8 428 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.62■□□□□ 0.25
CPSF7-202ENST00000394888 TATDN2Q93075 761 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 KRIT1O00522 736 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 ATP2A1O14983 1001 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 CYP26A1O43174 497 aa16.62■□□□□ 0.25
CPSF7-202ENST00000394888 GMPSP49915 693 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-202ENST00000394888 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-202ENST00000394888 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms