RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 PRKCEQ02156 737 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 IKQ13123 557 aaPredicted RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 TERF2Q15554 542 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 GLIS1Q8NBF1 620 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 PSPC1Q8WXF1 523 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 RABGGTAQ92696 567 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 RNF19AQ9NV58 838 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 MYO18AQ92614 2054 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 HCRTO43612 131 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 NPTXRO95502 500 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 MYCLP12524 364 aaPredicted RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 GALCP54803 685 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 SPAG1Q07617 926 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 SHC3Q92529 594 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CDCA5Q96FF9 252 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 PIWIL1Q96J94 861 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 ELP3Q9H9T3 547 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 ODF2LQ9ULJ1 636 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 MRPL11Q9Y3B7 192 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 ATG2AQ2TAZ0 1938 aa9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 TESPA1A2RU30 521 aaPredicted RBP9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 BTNL10A8MVZ5 291 aa9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 SNAI1O95863 264 aaPredicted RBP9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 CASQ1P31415 396 aa9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 SV2AQ7L0J3 742 aa9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 NOC3LQ8WTT2 800 aaKnown RBP9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 GPR20Q99678 358 aa9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 WDR83Q9BRX9 315 aaKnown RBP9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 ISCUQ9H1K1 167 aa9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 MAGEC2Q9UBF1 373 aaPredicted RBP9.21□□□□□ -0.93
GAPVD1-204ENST00000394083 LMNB1P20700 586 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 DCAF17Q5H9S7 520 aaPredicted RBP9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 NSMFQ6X4W1 530 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 SAMD3Q8N6K7 520 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 EFCC1Q9HA90 598 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 SIX4Q9UIU6 781 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 CHD5Q8TDI0 1954 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 NCANO14594 1321 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 SLC16A3O15427 465 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 AFPP02771 609 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 ENOX2Q16206 610 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 EEPD1Q7L9B9 569 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 PRUNE1Q86TP1 453 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 RASGEF1CQ8N431 466 aa9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 INTS2Q9H0H0 1204 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-204ENST00000394083 DOCK4Q8N1I0 1966 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 ZNF233A6NK53 670 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 AFF1P51825 1210 aaKnown RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 TRIM14Q14142 442 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 ZDHHC24Q6UX98 284 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 PPFIBP1Q86W92 1011 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 TWNKQ96RR1 684 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 NAPGQ99747 312 aaPredicted RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 C16orf70Q9BSU1 422 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 MAGEB5Q9BZ81 275 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 CELF4Q9BZC1 486 aaKnown RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 CYP26B1Q9NR63 512 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SLC26A4O43511 780 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SERPING1P05155 500 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SETQ01105 290 aaPredicted RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SPRED3Q2MJR0 410 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 CASKIN2Q8WXE0 1202 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 WNT8BQ93098 351 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SPATC1LQ9H0A9 340 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 NUB1Q9Y5A7 615 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SHROOM3Q8TF72 1996 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 IVDP26440 423 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 TNIP1Q15025 636 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 FBXO16Q8IX29 292 aaPredicted RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 CCDC65Q8IXS2 484 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 FAM186BQ8IYM0 893 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 WHAMMQ8TF30 809 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 APEX2Q9UBZ4 518 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 HPCAL4Q9UM19 191 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SPDYE5A6NIY4 337 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 ZNF132P52740 706 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 SNRNP35Q16560 246 aaKnown RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 TEX35Q5T0J7 233 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 CCNI2Q6ZMN8 369 aaPredicted RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 AGGF1Q8N302 714 aaeCLIP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 TMEM40Q8WWA1 233 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 NIFKQ9BYG3 293 aaKnown RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 ZDHHC18Q9NUE0 388 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 ARMCX3Q9UH62 379 aaPredicted RBP9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 CNTN6Q9UQ52 1028 aa9.2□□□□□ -0.94
GAPVD1-204ENST00000394083 OBSL1O75147 1896 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 ARHGAP1Q07960 439 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 RASSF8Q8NHQ8 419 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 NACC1Q96RE7 527 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 SH3GL2Q99962 352 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 TEKT3Q9BXF9 490 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 ZHX3Q9H4I2 956 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 DNAJC12Q9UKB3 198 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 PMM2O15305 246 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 ZSCAN12O43309 604 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 MUTP22033 750 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 ACOT2P49753 483 aa9.19□□□□□ -0.94
GAPVD1-204ENST00000394083 RNASE9P60153 205 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms