RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SNIP1Q8TAD8 396 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 SH3RF3Q8TEJ3 882 aaPredicted RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLC12A9Q9BXP2 914 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 B3GNT5Q9BYG0 378 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TXLNGYQ9BZA5 131 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 SPRY4Q9C004 299 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 PAK6Q9NQU5 681 aaPredicted RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 BTBD7Q9P203 1132 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM135BQ49AJ0 1406 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 LAMA4Q16363 1823 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 CNTNAP5Q8WYK1 1306 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TRAV20A0A0B4J274 112 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 PCDH17O14917 1159 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TRPA1O75762 1119 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 U2AF1L5P0DN76 240 aaPredicted RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 PF4V1P10720 104 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 CD247P20963 164 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MSX1P28360 303 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 U2AF1Q01081 240 aaKnown RBP eCLIP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 GAB4Q2WGN9 574 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MFSD5Q6N075 450 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 RFX8Q6ZV50 586 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TCP11L2Q8N4U5 519 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 OTUD6BQ8N6M0 293 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 BSNDQ8WZ55 320 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 SMARCC1Q92922 1105 aaPredicted RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ITPKCQ96DU7 683 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 PIWIL1Q96J94 861 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 NLRP3Q96P20 1036 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 HSD3B7Q9H2F3 369 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FRRS1LQ9P0K9 344 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLC30A1Q9Y6M5 507 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 NSD2O96028 1365 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MINDY4BA8MYZ0 360 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 H0Y858 1186 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TOMM70O94826 608 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 CYP17A1P05093 508 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 LAMP2P13473 410 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 GYS1P13807 737 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 NPR1P16066 1061 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 POLR2BP30876 1174 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 USP11P51784 963 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TLE2Q04725 743 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ERV3-1Q14264 604 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 PTPN21Q16825 1174 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ANO6Q4KMQ2 910 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 VARS2Q5ST30 1063 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MAP3K21Q5TCX8 1036 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 CNKSR3Q6P9H4 555 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MON1AQ86VX9 555 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 CCDC116Q8IYX3 515 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 STK11IPQ8N1F8 1099 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 GMCL1P1Q8NEA9 526 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MMP19Q99542 508 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 NPAS1Q99742 590 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MUC13Q9H3R2 512 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 STARD7Q9NQZ5 370 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ACSL6Q9UKU0 697 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TTLL3Q9Y4R7 772 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FHOD1Q9Y613 1164 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM90A18PA6NE21 464 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM90A16PA6NEW6 464 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 PGPEP1LA6NFU8 196 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM90A9PA6NNJ1 464 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM90A5PA8MXJ8 464 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 H0Y626 953 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ADAMTS3O15072 1205 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 INHBBP09529 407 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM90A15PP0C7V4 464 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM90A14PP0C7W9 464 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 HOXA10P31260 410 aaPredicted RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAPQ12884 760 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 EIF2B5Q13144 721 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 DDX10Q13206 875 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ANO4Q32M45 955 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 CPXCR1Q8N123 301 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 AOPEPQ8N6M6 819 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 IGSF22Q8N9C0 903 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 NLGN2Q8NFZ4 835 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 Q96M66 194 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ALPK1Q96QP1 1244 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 WDR24Q96S15 920 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ELF4Q99607 663 aaPredicted RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 SMAD5Q99717 465 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 EDEM3Q9BZQ6 932 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 WDR35Q9P2L0 1181 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FEZ2Q9UHY8 353 aaPredicted RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FCF1Q9Y324 198 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 PCDHGB6Q9Y5F9 930 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 DOT1LQ8TEK3 1739 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZNF521Q96K83 1311 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZFHX4Q86UP3 3567 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CHURC1-FNTBB4DL54 471 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 MAFKO60675 156 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 TBX10O75333 385 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 GALTP07902 379 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CNPP09543 421 aaKnown RBP2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 IGFBP2P18065 325 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 CCT5P48643 541 aa2.24□□□□□ -2.05
SMARCAD1-202ENST00000359052 PAPOLAP51003 745 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms