RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 DEFB118Q96PH6 123 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 MTG1Q9BT17 334 aaPredicted RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 FAM49AQ9H0Q0 323 aaPredicted RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 FAM207AQ9NSI2 230 aaPredicted RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 LUC7L2Q9Y383 392 aaKnown RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 TNRC18O15417 2968 aaPredicted RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 GNAT1P11488 350 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 BFSP1Q12934 665 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 HSP90AA2PQ14568 343 aaPredicted RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 SNRNP35Q16560 246 aaKnown RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 MARCH8Q5T0T0 291 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 SLC39A4Q6P5W5 647 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 GPD1LQ8N335 351 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 U2AF1L4Q8WU68 220 aaKnown RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 IQCDQ96DY2 449 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 FAM213AQ9BRX8 229 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 CRACR2AQ9BSW2 395 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 C17orf102A2RUQ5 167 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 MFAP3LO75121 409 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 CYP2C9P11712 490 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 HARSP12081 509 aaKnown RBP18.89■□□□□ 0.61
CLDN4-201ENST00000340958 GJA8P48165 433 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 VAMP7P51809 220 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 USP37Q86T82 979 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 TC2NQ8N9U0 490 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 SLC35C1Q96A29 364 aa18.89■□□□□ 0.61
CLDN4-201ENST00000340958 BAG1Q99933 345 aaPredicted RBP18.89■□□□□ 0.61
CLDN4-201ENST00000340958 LSM14BQ9BX40 385 aaKnown RBP18.89■□□□□ 0.61
CLDN4-201ENST00000340958 A0A087WZ62 844 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 TRIM49P0CI25 452 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 TRIM49CP0CI26 452 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 KRT9P35527 623 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 FXR1P51114 621 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 PTENP60484 403 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 PRPF4BQ13523 1007 aaKnown RBP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 CXCL17Q6UXB2 119 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 CACNA2D4Q7Z3S7 1137 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 CBWD2Q8IUF1 395 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 KCNN1Q92952 543 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 CCDC51Q96ER9 411 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 BORCS6Q96GS4 357 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 FDXACB1Q9BRP7 624 aaPredicted RBP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 MSTO1Q9BUK6 570 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 UPF3AQ9H1J1 476 aaKnown RBP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 KIAA1586Q9HCI6 787 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 AGO2Q9UKV8 859 aaKnown RBP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 PYCARDQ9ULZ3 195 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 GINS2Q9Y248 185 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 TTC26A0AVF1 554 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 HAS3O00219 553 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 MAPK13O15264 365 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 CLDN3O15551 220 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 PIGRP01833 764 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 RGS19P49795 217 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 NLRP11P59045 1033 aaKnown RBP18.88■□□□□ 0.61
CLDN4-201ENST00000340958 CETN1Q12798 172 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 ZPBP2Q6X784 338 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 GBP6Q6ZN66 633 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 CCDC127Q96BQ5 260 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 PANX2Q96RD6 677 aa18.88■□□□□ 0.61
CLDN4-201ENST00000340958 ZNF233A6NK53 670 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 EXTL3O43909 919 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 SGPL1O95470 568 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 LDHAP00338 332 aaKnown RBP18.87■□□□□ 0.61
CLDN4-201ENST00000340958 CCZ1BP86790 482 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 CCZ1P86791 482 aaPredicted RBP18.87■□□□□ 0.61
CLDN4-201ENST00000340958 CDC42EP1Q00587 391 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 POU5F1BQ06416 359 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 EXOC3L4Q17RC7 722 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 ZBTB33Q86T24 672 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 KIAA0319LQ8IZA0 1049 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 LINC01465Q8N7H1 131 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 ZSWIM2Q8NEG5 633 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 CCDC113Q9H0I3 377 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 ABHD10Q9NUJ1 306 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 PRMT7Q9NVM4 692 aaPredicted RBP18.87■□□□□ 0.61
CLDN4-201ENST00000340958 ZNHIT6Q9NWK9 470 aaKnown RBP18.87■□□□□ 0.61
CLDN4-201ENST00000340958 HDAC6Q9UBN7 1215 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 DDX20Q9UHI6 824 aaKnown RBP18.87■□□□□ 0.61
CLDN4-201ENST00000340958 CAPN11Q9UMQ6 739 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 SIK3Q9Y2K2 1263 aa18.87■□□□□ 0.61
CLDN4-201ENST00000340958 ACKR2O00590 384 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 STX10O60499 249 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 MSCO60682 206 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 FMO5P49326 533 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 TMEM62Q0P6H9 643 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 FAM47CQ5HY64 1035 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 VTI1AQ96AJ9 217 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 ZBTB45Q96K62 511 aaPredicted RBP18.86■□□□□ 0.61
CLDN4-201ENST00000340958 NFKBIZQ9BYH8 718 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 KAT6AQ92794 2004 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 SMIM35A0A1B0GVV1 85 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 N4BP1O75113 896 aaKnown RBP18.86■□□□□ 0.61
CLDN4-201ENST00000340958 TOM1L1O75674 476 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 MYL7Q01449 175 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 MBTD1Q05BQ5 628 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 KCNMA1Q12791 1236 aa18.86■□□□□ 0.61
CLDN4-201ENST00000340958 KCNA10Q16322 511 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms