RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 RTKN2Q8IZC4 609 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 PPP1R14BQ96C90 147 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 TRIM31Q9BZY9 425 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 INTUQ9ULD6 942 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 TRIM49BA6NDI0 452 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 PPP1R3GB7ZBB8 358 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 FTCDO95954 541 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 COPS2P61201 443 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 LRRC14Q15048 493 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 CCDC125Q86Z20 511 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 KSR1Q8IVT5 923 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 SIX5Q8N196 739 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 NUDCD1Q96RS6 583 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 TMEM47Q9BQJ4 181 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 FAM129AQ9BZQ8 928 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 CSRNP2Q9H175 543 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 DNAJC18Q9H819 358 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 ETNK1Q9HBU6 452 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 MLXIPLQ9NP71 852 aa11.05□□□□□ -0.64
SF3B2-201ENST00000322535 ZNF263O14978 683 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 ACTN4O43707 911 aaKnown RBP11.04□□□□□ -0.64
SF3B2-201ENST00000322535 PEX14O75381 377 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 UBTFL6P0CB48 400 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-201ENST00000322535 ZCCHC18P0CG32 403 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 PEX5P50542 639 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 CACNA2D1P54289 1103 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 BIRC3Q13489 604 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 ILDR2Q71H61 639 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 CACNA2D4Q7Z3S7 1137 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 SESTD1Q86VW0 696 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 JDP2Q8WYK2 163 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 CSPG5O95196 566 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 ASLP04424 464 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 GNAZP19086 355 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 USH1GQ495M9 461 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 ERMARDQ5T6L9 678 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 NT5DC1Q5TFE4 455 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 SYDE2Q5VT97 1194 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 FBXL16Q8N461 479 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 NCSTNQ92542 709 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 FHDC1Q9C0D6 1143 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-201ENST00000322535 TMEM39BQ9GZU3 492 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 PPME1Q9Y570 386 aa11.04□□□□□ -0.64
SF3B2-201ENST00000322535 NPHP3-ACAD11A0A0J9YXS1 232 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 HSPA9P38646 679 aaKnown RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 JAG1P78504 1218 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 TBC1D10BQ4KMP7 808 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 FAM209AQ5JX71 171 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 RSBN1LQ6PCB5 846 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 C16orf86Q6ZW13 317 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SUPT20HQ8NEM7 779 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 NELFBQ8WX92 580 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 DHTKD1Q96HY7 919 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 ZDHHC15Q96MV8 337 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SEZ6LQ9BYH1 1024 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 INTS9Q9NV88 658 aaKnown RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 PCDHB6Q9Y5E3 794 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 A0A087X0B3 334 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 FGRP09769 529 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 COL6A2P12110 1019 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SLC16A2P36021 539 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 PTDSS1P48651 473 aaKnown RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SNAP25P60880 206 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 HPCAP84074 193 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 CCDC6Q16204 474 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SH3D19Q5HYK7 790 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 HHIPL2Q6UWX4 724 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 OSTM1Q86WC4 334 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 MAP7D3Q8IWC1 876 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 MB21D1Q8N884 522 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 RASGRP4Q8TDF6 673 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 LENG1Q96BZ8 264 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 FAM136AQ96C01 138 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 MAML3Q96JK9 1138 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 RAB17Q9H0T7 212 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 METTL5Q9NRN9 209 aaKnown RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-201ENST00000322535 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 SNED1Q8TER0 1413 aa11.03□□□□□ -0.64
SF3B2-201ENST00000322535 USP17L5A8MUK1 530 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 STK10O94804 968 aaKnown RBP11.02□□□□□ -0.64
SF3B2-201ENST00000322535 TAL1P17542 331 aaPredicted RBP11.02□□□□□ -0.64
SF3B2-201ENST00000322535 GALK1P51570 392 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 NLRP5P59047 1200 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 TGFB2P61812 414 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 ERVK-9P63128 1117 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 DLGAP5Q15398 846 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 ZYXQ15942 572 aaKnown RBP11.02□□□□□ -0.64
SF3B2-201ENST00000322535 SLC35G1Q2M3R5 365 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 PHLDB3Q6NSJ2 640 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 NEPROQ6NW34 567 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 MREGQ8N565 214 aa11.02□□□□□ -0.64
SF3B2-201ENST00000322535 LSM14AQ8ND56 463 aaKnown RBP11.02□□□□□ -0.64
SF3B2-201ENST00000322535 CCDC127Q96BQ5 260 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms