RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Rnf6Q9DBU5 667 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Arhgef7Q9ES28 862 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Trp53inp1Q9QXE4 239 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Orc1Q9Z1N2 840 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Mtmr2Q9Z2D1 643 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pds5aQ6A026 1332 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Arhgef10Q8C033 1345 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rasal2E9PW37 1286 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Flot1O08917 428 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Hoxd11P23813 323 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pax7P47239 503 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 InhbcP55104 352 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Stmn4P63042 189 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sox13Q04891 613 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Sec31aQ3UPL0 1230 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Tmprss11aQ3UQ41 389 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ttbk2Q3UVR3 1243 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pls1Q3V0K9 630 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cyp2c67Q569X9 491 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 A1cfQ5YD48 595 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 CtcfQ61164 736 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Nfe2l1Q61985 741 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ppp1r13bQ62415 1087 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Peg10Q7TN75 958 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Q8BGD0 127 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Bola2Q8BGS2 86 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 MslnlQ8C160 685 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm5591Q8CDK1 855 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Tdrd7Q8K1H1 1086 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 BlmhQ8R016 455 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rbm19Q8R3C6 952 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Plscr1Q9JJ00 328 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ddx20Q9JJY4 825 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Myl7Q9QVP4 175 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Entpd5Q9WUZ9 427 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Extl3Q9WVL6 918 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc78D3Z5T1 437 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ccdc74aE9Q9U8 364 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Cd151O35566 253 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Per1O35973 1291 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Xirp1O70373 1129 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Pcif1P59114 706 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 S100a5P63084 93 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Terf1P70371 421 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 ZufspQ3T9Z9 577 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Serpinb6dQ3UWK8 375 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Trim80Q3V061 624 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Spdye4aQ5IBH6 268 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Meis1Q60954 390 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 FdxrQ61578 494 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ces1eQ64176 562 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Btnl9Q8BJE2 536 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ppp1r11Q8K1L5 131 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Bst2Q8R2Q8 172 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ino80bQ99PT3 375 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Ddx56Q9D0R4 546 aaKnown RBP6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 TtpalQ9D3D0 343 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 IscuQ9D7P6 168 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Rasgrp2Q9QUG9 608 aa6.72□□□□□ -1.33
Lig4-202ENSMUST00000170033 Fam205a1D3YZF6 1314 aa6.71□□□□□ -1.33
Lig4-202ENSMUST00000170033 Gm12666A2AMD0 254 aaKnown RBP6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 PtenO08586 403 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Men1O88559 611 aaKnown RBP6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Cyp11b2P15539 500 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tcea3P23881 347 aaKnown RBP6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 TraddQ3U0V2 310 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Hdhd2Q3UGR5 259 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Vwa3aQ3UVV9 1148 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 MaeaQ4VC33 396 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Znf827Q505G8 1078 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Foxd4Q60688 444 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Orc2Q60862 576 aaKnown RBP6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Krt31Q61765 416 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Pim2Q62070 370 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Slain1Q68FF7 579 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Washc5Q8C2E7 1159 aaKnown RBP6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Apol9bQ8C7I4 310 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Apol9aQ8VDU3 310 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Grk2Q99MK8 689 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Rassf3Q99P51 232 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Cd2bp2Q9CWK3 342 aaKnown RBP6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Fam173bQ9D1Z3 247 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Olr1Q9EQ09 363 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Jph3Q9ET77 744 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Slc40a1Q9JHI9 570 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Col1a1P11087 1453 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Mical3Q8CJ19 1993 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 NrapQ80XB4 1728 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ttc13A0A1L1SSC7 844 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Dnaaf5B9EJR8 853 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Gm2030D3Z7C4 212 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Nedd4P46935 887 aaKnown RBP6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 NfiaQ02780 532 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Fgfr4Q03142 799 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Znf583Q3V080 568 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Kctd1Q5M956 257 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ctnna2Q61301 953 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Hdac10Q6P3E7 666 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Nacc1Q7TSZ8 514 aa6.71□□□□□ -1.34
Lig4-202ENSMUST00000170033 Nucks1Q80XU3 234 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms