RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 BCL7CQ8WUZ0 217 aaPredicted RBP19.84■□□□□ 0.77
SSBP1-215ENST00000612337 GTF3C6Q969F1 213 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 PBXIP1Q96AQ6 731 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 NECTIN4Q96NY8 510 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 BMP2KQ9NSY1 1161 aaPredicted RBP19.84■□□□□ 0.77
SSBP1-215ENST00000612337 DNAJB4Q9UDY4 337 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 NR2E1Q9Y466 385 aa19.84■□□□□ 0.77
SSBP1-215ENST00000612337 CNTNAP2Q9UHC6 1331 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 ZBTB39O15060 712 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 SLITRK3O94933 977 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 SLC11A1P49279 550 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 CYP4A11Q02928 519 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 ME3Q16798 604 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 PTPN21Q16825 1174 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 UBXN11Q5T124 520 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 NECAB1Q8N987 351 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 TMEM87AQ8NBN3 555 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 RNF149Q8NC42 400 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 AUTS2Q8WXX7 1259 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 MTRQ99707 1265 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 GBP3Q9H0R5 595 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 RSAD1Q9HA92 442 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 DZANK1Q9NVP4 752 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 STK39Q9UEW8 545 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 CDH22Q9UJ99 828 aa19.83■□□□□ 0.77
SSBP1-215ENST00000612337 B4GALT3O60512 393 aa19.82■□□□□ 0.76
SSBP1-215ENST00000612337 PCBP1Q15365 356 aaKnown RBP eCLIP19.82■□□□□ 0.76
SSBP1-215ENST00000612337 ZNF280BQ86YH2 543 aa19.82■□□□□ 0.76
SSBP1-215ENST00000612337 TPH2Q8IWU9 490 aa19.82■□□□□ 0.76
SSBP1-215ENST00000612337 EIF2AK1Q9BQI3 630 aaKnown RBP19.82■□□□□ 0.76
SSBP1-215ENST00000612337 VN1R3Q9BXE9 311 aa19.82■□□□□ 0.76
SSBP1-215ENST00000612337 POMKQ9H5K3 350 aa19.82■□□□□ 0.76
SSBP1-215ENST00000612337 KANSL3Q9P2N6 904 aa19.82■□□□□ 0.76
SSBP1-215ENST00000612337 LYPLA2O95372 231 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 LARGE1O95461 756 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 SP100P23497 879 aaPredicted RBP19.81■□□□□ 0.76
SSBP1-215ENST00000612337 MTHFRP42898 656 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 MXD4Q14582 209 aaPredicted RBP19.81■□□□□ 0.76
SSBP1-215ENST00000612337 CALCRLQ16602 461 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 ALYREFQ86V81 257 aaKnown RBP19.81■□□□□ 0.76
SSBP1-215ENST00000612337 CNNM3Q8NE01 707 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 RIPOR3Q96MK2 946 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 HSD17B14Q9BPX1 270 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 TMEM175Q9BSA9 504 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 XPNPEP1Q9NQW7 623 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 TSHZ2Q9NRE2 1034 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 PCDHA12Q9UN75 941 aa19.81■□□□□ 0.76
SSBP1-215ENST00000612337 DDHD2O94830 711 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 ERLIN2O94905 339 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 ALDH2P05091 517 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 NCLP19338 710 aaKnown RBP19.8■□□□□ 0.76
SSBP1-215ENST00000612337 AFF1P51825 1210 aaKnown RBP19.8■□□□□ 0.76
SSBP1-215ENST00000612337 PTENP60484 403 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 PTPN14Q15678 1187 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 RARS2Q5T160 578 aaKnown RBP19.8■□□□□ 0.76
SSBP1-215ENST00000612337 PPFIBP1Q86W92 1011 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 SUGP1Q8IWZ8 645 aaKnown RBP19.8■□□□□ 0.76
SSBP1-215ENST00000612337 FBXL6Q8N531 539 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 NSUN7Q8NE18 718 aaKnown RBP19.8■□□□□ 0.76
SSBP1-215ENST00000612337 SLC22A17Q8WUG5 538 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 CCDC51Q96ER9 411 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 ASIC4Q96FT7 647 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 UBN1Q9NPG3 1134 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 ANKEF1Q9NU02 776 aa19.8■□□□□ 0.76
SSBP1-215ENST00000612337 BTBD18B2RXH4 712 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 EPCAMP16422 314 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 AXLP30530 894 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 POU5F1BQ06416 359 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 TFDP1Q14186 410 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 KIAA1841Q6NSI8 718 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 ZBTB33Q86T24 672 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 IFNLR1Q8IU57 520 aaPredicted RBP19.79■□□□□ 0.76
SSBP1-215ENST00000612337 DIS3L2Q8IYB7 885 aaKnown RBP19.79■□□□□ 0.76
SSBP1-215ENST00000612337 C12orf76Q8N812 135 aaPredicted RBP19.79■□□□□ 0.76
SSBP1-215ENST00000612337 SMG8Q8ND04 991 aaKnown RBP19.79■□□□□ 0.76
SSBP1-215ENST00000612337 FAM193BQ96PV7 902 aaPredicted RBP19.79■□□□□ 0.76
SSBP1-215ENST00000612337 TTC12Q9H892 705 aaPredicted RBP19.79■□□□□ 0.76
SSBP1-215ENST00000612337 FAN1Q9Y2M0 1017 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 USP34Q70CQ2 3546 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 MYO10Q9HD67 2058 aa19.79■□□□□ 0.76
SSBP1-215ENST00000612337 C2CD4DB7Z1M9 353 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 INPPL1O15357 1258 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 NEMFO60524 1076 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 TSPAN1O60635 241 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 DGAT1O75907 488 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 POMCP01189 267 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 WEE2P0C1S8 567 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 ITGA4P13612 1032 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 NCBP1Q09161 790 aaKnown RBP19.78■□□□□ 0.76
SSBP1-215ENST00000612337 ATAT1Q5SQI0 421 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 NOTUMQ6P988 496 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 MTMR9Q96QG7 549 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 PRRX2Q99811 253 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 EMILIN2Q9BXX0 1053 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 IPPQ9Y573 584 aa19.78■□□□□ 0.76
SSBP1-215ENST00000612337 WNT7AO00755 349 aa19.77■□□□□ 0.76
SSBP1-215ENST00000612337 NRP1O14786 923 aa19.77■□□□□ 0.76
SSBP1-215ENST00000612337 JAK2O60674 1132 aa19.77■□□□□ 0.76
SSBP1-215ENST00000612337 LILRB3O75022 631 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms