RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PIGRP01833 764 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 NR3C1P04150 777 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 PRKCBP05771 671 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 NR2F2P24468 414 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 GJA8P48165 433 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 LIG4P49917 911 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 PTK7Q13308 1070 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 ADAM9Q13443 819 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 FAM187BQ17R55 369 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 CDKAL1Q5VV42 579 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 SLFN12LQ6IEE8 588 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 SLC9A9Q8IVB4 645 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 C12orf56Q8IXR9 622 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 TMEM174Q8WUU8 243 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 PRIMPOLQ96LW4 560 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 CCDC113Q9H0I3 377 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 IFT122Q9HBG6 1241 aa20.36■□□□□ 0.85
SSBP4-212ENST00000601919 ACKR2O00590 384 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 CAND2O75155 1236 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 GPR32O75388 356 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 ZNF18P17022 549 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 EEF1GP26641 437 aaKnown RBP20.35■□□□□ 0.85
SSBP4-212ENST00000601919 CRYBB1P53674 252 aaPredicted RBP20.35■□□□□ 0.85
SSBP4-212ENST00000601919 MBTD1Q05BQ5 628 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 NCBP1Q09161 790 aaKnown RBP20.35■□□□□ 0.85
SSBP4-212ENST00000601919 KIZQ2M2Z5 673 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 ARMCX5Q6P1M9 558 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 ZPBP2Q6X784 338 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 TAS1R3Q7RTX0 852 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 FILIP1Q7Z7B0 1213 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 ZC3H3Q8IXZ2 948 aaKnown RBP20.35■□□□□ 0.85
SSBP4-212ENST00000601919 CTAGE1Q96RT6 745 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 ADAMTS10Q9H324 1103 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 FZD8Q9H461 694 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 SAMSN1Q9NSI8 373 aaKnown RBP20.35■□□□□ 0.85
SSBP4-212ENST00000601919 HTTP42858 3142 aa20.35■□□□□ 0.85
SSBP4-212ENST00000601919 KIAA0391O15091 583 aaKnown RBP20.34■□□□□ 0.85
SSBP4-212ENST00000601919 TPM2P07951 284 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 GARTP22102 1010 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 MRPS6P82932 125 aaKnown RBP20.34■□□□□ 0.85
SSBP4-212ENST00000601919 PLCB2Q00722 1185 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 PRPF4BQ13523 1007 aaKnown RBP20.34■□□□□ 0.85
SSBP4-212ENST00000601919 TMEM132AQ24JP5 1023 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 LRRC55Q6ZSA7 311 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 PPP1R16BQ96T49 567 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 HSD3B7Q9H2F3 369 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 GINS2Q9Y248 185 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 FRMD4BQ9Y2L6 1034 aa20.34■□□□□ 0.85
SSBP4-212ENST00000601919 KCNJ18B7U540 433 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 CLIC2O15247 247 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 SLC16A3O15427 465 aaKnown RBP20.33■□□□□ 0.85
SSBP4-212ENST00000601919 ERLIN2O94905 339 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 SERPINC1P01008 464 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 EPB41P11171 864 aaKnown RBP20.33■□□□□ 0.85
SSBP4-212ENST00000601919 EIF4BP23588 611 aaKnown RBP20.33■□□□□ 0.85
SSBP4-212ENST00000601919 TMEM62Q0P6H9 643 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 KCNJ12Q14500 433 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 TCP11X2Q5H9J9 407 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 SARM1Q6SZW1 724 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 ZNF668Q96K58 619 aaPredicted RBP20.33■□□□□ 0.85
SSBP4-212ENST00000601919 MKNK1Q9BUB5 465 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 CELF4Q9BZC1 486 aaKnown RBP20.33■□□□□ 0.85
SSBP4-212ENST00000601919 SENP6Q9GZR1 1112 aaPredicted RBP20.33■□□□□ 0.85
SSBP4-212ENST00000601919 MCOLN1Q9GZU1 580 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 TRMT13Q9NUP7 481 aaKnown RBP20.33■□□□□ 0.85
SSBP4-212ENST00000601919 TRPV2Q9Y5S1 764 aa20.33■□□□□ 0.85
SSBP4-212ENST00000601919 TLR3O15455 904 aaKnown RBP20.32■□□□□ 0.84
SSBP4-212ENST00000601919 TPM3P06753 285 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 DARSP14868 501 aaKnown RBP20.32■□□□□ 0.84
SSBP4-212ENST00000601919 SFPQP23246 707 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSBP4-212ENST00000601919 THPOP40225 353 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 CDK7P50613 346 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 CCDC40Q4G0X9 1142 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 APBB1IPQ7Z5R6 666 aaPredicted RBP20.32■□□□□ 0.84
SSBP4-212ENST00000601919 CREBRFQ8IUR6 639 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 CCDC155Q8N6L0 562 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 XXYLT1Q8NBI6 393 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 POMGNT1Q8WZA1 660 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 OSMRQ99650 979 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 TARS2Q9BW92 718 aaKnown RBP20.32■□□□□ 0.84
SSBP4-212ENST00000601919 METTL14Q9HCE5 456 aaKnown RBP20.32■□□□□ 0.84
SSBP4-212ENST00000601919 DMAC2Q9NW81 257 aa20.32■□□□□ 0.84
SSBP4-212ENST00000601919 CNTNAP2Q9UHC6 1331 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 CBFA2T2O43439 604 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 B4GALT4O60513 344 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 EXOC3O60645 756 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 TOM1L1O75674 476 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 PSMC2P35998 433 aaKnown RBP20.31■□□□□ 0.84
SSBP4-212ENST00000601919 MATR3P43243 847 aaKnown RBP eCLIP20.31■□□□□ 0.84
SSBP4-212ENST00000601919 MTIF2P46199 727 aaKnown RBP20.31■□□□□ 0.84
SSBP4-212ENST00000601919 CYP2J2P51589 502 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 FILIP1LQ4L180 1135 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 HSP90AA4PQ58FG1 418 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 ATF7IP2Q5U623 682 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 CEP135Q66GS9 1140 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 TSHZ1Q6ZSZ6 1077 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 CNOT6LQ96LI5 555 aaKnown RBP20.31■□□□□ 0.84
SSBP4-212ENST00000601919 ACO2Q99798 780 aaKnown RBP20.31■□□□□ 0.84
SSBP4-212ENST00000601919 TRIM5Q9C035 493 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 MINDY3Q9H8M7 445 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms