RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ARL1P40616 181 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 HARS2P49590 506 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 NECTIN1Q15223 517 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 GRIK4Q16099 956 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 NFRKBQ6P4R8 1299 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 MTERF4Q7Z6M4 381 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 CRACR2AQ9BSW2 395 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ASNSD1Q9NWL6 643 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 TBKBP1A7MCY6 615 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PHF20L1A8MW92 1017 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 NFKBIEO00221 500 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 P4HA2O15460 535 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ATICP31939 592 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 SERPINB6P35237 376 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 GTF2H3Q13889 308 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 CTTNQ14247 550 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 DUSP28Q4G0W2 176 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 AFG1LQ8WV93 481 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ATP2A3Q93084 1043 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 IL17RAQ96F46 866 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 SLC9A7Q96T83 725 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ARHGAP39Q9C0H5 1083 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ZMYND12Q9H0C1 365 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 SH3BP5O60239 455 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 CLTBP09497 229 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 SREBF1P36956 1147 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 AVPR1AP37288 418 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 GRIK1P39086 918 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ITIH3Q06033 890 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ITKQ08881 620 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PPP1R7Q15435 360 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF658Q5TYW1 1059 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 USP17L6PQ6QN14 398 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 RASAL3Q86YV0 1011 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 RDH13Q8NBN7 331 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 RIN2Q8WYP3 895 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 RAD54LQ92698 747 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PDCD2LQ9BRP1 358 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 RANBP17Q9H2T7 1088 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 JMJD4Q9H9V9 463 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 BCCIPQ9P287 314 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 LRRC37A3O60309 1634 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 SPDYE16A6NNV3 312 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 A8MXQ7 604 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 MAGEC1O60732 1142 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 CRCPO75575 148 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 MCF2P10911 925 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 SLC11A2P49281 568 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 NDUFV1P49821 464 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF445P59923 1031 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ASPHQ12797 758 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 PTK7Q13308 1070 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 MAN2A1Q16706 1144 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 C4orf19Q8IY42 314 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 NALCNQ8IZF0 1738 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 CCDC89Q8N998 374 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 FOPNLQ96NB1 174 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 PPP1R12CQ9BZL4 782 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 RRN3Q9NYV6 651 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 MYMKA6NI61 221 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 SLC16A3O15427 465 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 PRPSAP2O60256 369 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 SYNCRIPO60506 623 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 CCL5P13501 91 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 TNNT1P13805 278 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 PTPN14Q15678 1187 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 Q4G0T1 1027 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 SGO2Q562F6 1265 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 KRBA2Q6ZNG9 492 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 TRMT11Q7Z4G4 463 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 METTL3Q86U44 580 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 CLSTN2Q9H4D0 955 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 RNF186Q9NXI6 227 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 DBR1Q9UK59 544 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF510Q9Y2H8 683 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 MYO1FO00160 1098 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 HMGB3O15347 200 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 BAIAP3O94812 1187 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 FBXO21O94952 628 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 NLRP11P59045 1033 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 MRPS6P82932 125 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 KRT39Q6A163 491 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 DNAJC24Q6P3W2 148 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF784Q8NCA9 323 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 REPS2Q8NFH8 660 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 OTUD7AQ8TE49 926 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 DYDC1Q8WWB3 177 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 P3H4Q92791 437 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 P2RX5Q93086 422 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 DTNBP1Q96EV8 351 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 TAAR1Q96RJ0 339 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 FBXO44Q9H4M3 255 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 THAP9Q9H5L6 903 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 IMPACTQ9P2X3 320 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms