RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PHACTR2O75167 634 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 GLI1P08151 1106 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 GUCY2DQ02846 1103 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 CLUL1Q15846 466 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 RHOT2Q8IXI1 618 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 RASGEF1CQ8N431 466 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 METTL13Q8N6R0 699 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 MCPH1Q8NEM0 835 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 AFAP1L1Q8TED9 768 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 ZKSCAN4Q969J2 545 aaPredicted RBP20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 HES6Q96HZ4 224 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 HINFPQ9BQA5 517 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 GPRC5CQ9NQ84 441 aa20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 SEPT11Q9NVA2 429 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-209ENST00000589838 KIAA1217Q5T5P2 1943 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 TISP43B9A030 160 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 H0YCG3 227 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 HSF2BPO75031 334 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 NPTX2P47972 431 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 ENPEPQ07075 957 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 ANO5Q75V66 913 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 WHAMMQ8TF30 809 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 CEP170P1Q96L14 293 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 RUFY1Q96T51 708 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 ACAD9Q9H845 621 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 FAM204AQ9H8W3 233 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 GABBR1Q9UBS5 961 aa20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 PPP1R1BQ9UD71 204 aaPredicted RBP20.74■□□□□ 0.91
PRKCSH-209ENST00000589838 TMEM150BA6NC51 233 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 HMGCS2P54868 508 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 RTP1P59025 263 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 RNASE9P60153 205 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 MRPS25P82663 173 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 SNRNP35Q16560 246 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 GNPTABQ3T906 1256 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 C1orf220Q5T0J3 134 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 CATSPERGQ6ZRH7 1159 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 DNAAF5Q86Y56 855 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 TMC2Q8TDI7 906 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 WNK4Q96J92 1243 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 SH2D3AQ9BRG2 576 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 TEX13BQ9BXU2 312 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 HOXC10Q9NYD6 342 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 ZNF214Q9UL59 606 aaPredicted RBP20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 PPP2R3BQ9Y5P8 575 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 PFASO15067 1338 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 GOLGA8KD6RF30 607 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 LRRN2O75325 713 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 KCNA2P16389 499 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 GTF2H1P32780 548 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 MFAP3P55082 362 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 HADHBP55084 474 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 PPATQ06203 517 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 TCEAL1Q15170 157 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 ARHGEF19Q8IW93 802 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 TMEM117Q9H0C3 514 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 TTC7AQ9ULT0 858 aaPredicted RBP20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 CD2APQ9Y5K6 639 aa20.73■□□□□ 0.91
PRKCSH-209ENST00000589838 MYPNQ86TC9 1320 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 DENND3A2RUS2 1198 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 AGPSO00116 658 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 DGAT1O75907 488 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 ZBTB48P10074 688 aaPredicted RBP20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 CNGA1P29973 690 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 ANGEL2Q5VTE6 544 aaKnown RBP20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 KRT39Q6A163 491 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 LEKR1Q6ZMV7 388 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 KLHL7Q8IXQ5 586 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 IFT81Q8WYA0 676 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 GOLPH3Q9H4A6 298 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 JPH1Q9HDC5 661 aaPredicted RBP20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 SLC9A2Q9UBY0 812 aa20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 NOC2LQ9Y3T9 749 aaKnown RBP20.72■□□□□ 0.91
PRKCSH-209ENST00000589838 ARID2Q68CP9 1835 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 RAD51CO43502 376 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 BUB1BO60566 1050 aaPredicted RBP20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 ABCB4P21439 1286 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 CARSP49589 748 aaKnown RBP20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 PPFIA1Q13136 1202 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 CUL1Q13616 776 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 PPP2R5EQ16537 467 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 TRMT1LQ7Z2T5 733 aaKnown RBP20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 MREGQ8N565 214 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 CCDC26Q8TAB7 109 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 IFT74Q96LB3 600 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 NAP1L3Q99457 506 aaPredicted RBP20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 ISCUQ9H1K1 167 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 TMEM8AQ9HCN3 771 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 CYP39A1Q9NYL5 469 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 NFU1Q9UMS0 254 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 ANKRD63C9JTQ0 380 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 KRIT1O00522 736 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 ADRB2P07550 413 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 CAPN2P17655 700 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 TMEM132BQ14DG7 1078 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 NOL9Q5SY16 702 aaKnown RBP20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 SWSAP1Q6NVH7 229 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 MIS18BP1Q6P0N0 1132 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 PLEKHO2Q8TD55 490 aa20.71■□□□□ 0.91
PRKCSH-209ENST00000589838 SLITRK6Q9H5Y7 841 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms