RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 RNF19AQ9NV58 838 aa18.14■□□□□ 0.49
DNMT1-221ENST00000589538 CNTNAP2Q9UHC6 1331 aa18.14■□□□□ 0.49
DNMT1-221ENST00000589538 SPTLC2O15270 562 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 PPP6R2O75170 966 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 ARF4P18085 180 aaPredicted RBP18.13■□□□□ 0.49
DNMT1-221ENST00000589538 PLCG1P19174 1290 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
DNMT1-221ENST00000589538 GATMP50440 423 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 KARSQ15046 597 aaKnown RBP18.13■□□□□ 0.49
DNMT1-221ENST00000589538 SLC27A1Q6PCB7 646 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 LINC00301Q8NCQ3 95 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 BSNDQ8WZ55 320 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 MRPL38Q96DV4 380 aaKnown RBP18.13■□□□□ 0.49
DNMT1-221ENST00000589538 TRIM6Q9C030 488 aaPredicted RBP18.13■□□□□ 0.49
DNMT1-221ENST00000589538 TYW1Q9NV66 732 aaKnown RBP18.13■□□□□ 0.49
DNMT1-221ENST00000589538 STK17AQ9UEE5 414 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 CFAP45Q9UL16 551 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
DNMT1-221ENST00000589538 KIAA1671Q9BY89 1806 aa18.13■□□□□ 0.49
DNMT1-221ENST00000589538 A0A1B0GUA9 196 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 CCDC169A6NNP5 214 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 N4BP3O15049 544 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 PRKCBP05771 671 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 TIGD5Q53EQ6 642 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 CLLU1OSQ5K130 101 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 UBXN11Q5T124 520 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 FOXD4L5Q5VV16 416 aaPredicted RBP18.12■□□□□ 0.49
DNMT1-221ENST00000589538 APBB1IPQ7Z5R6 666 aaPredicted RBP18.12■□□□□ 0.49
DNMT1-221ENST00000589538 MICALL1Q8N3F8 863 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 HELQQ8TDG4 1101 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 FOXD4L4Q8WXT5 416 aaPredicted RBP18.12■□□□□ 0.49
DNMT1-221ENST00000589538 RAD54LQ92698 747 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 SYMPKQ92797 1274 aaKnown RBP18.12■□□□□ 0.49
DNMT1-221ENST00000589538 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 ODF2LQ9ULJ1 636 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 COL6A3P12111 3177 aa18.12■□□□□ 0.49
DNMT1-221ENST00000589538 MYH11P35749 1972 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 H0YCG3 227 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 K7ERI5 159 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 ACKR2O00590 384 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 ITGA4P13612 1032 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 SCP2P22307 547 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 DDIT3P35638 169 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 PPM1AP35813 382 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 NPTX2P47972 431 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 SMTNP53814 917 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 PEX3P56589 373 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 PRPF4BQ13523 1007 aaKnown RBP18.11■□□□□ 0.49
DNMT1-221ENST00000589538 TMEM132AQ24JP5 1023 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 NOMO2Q5JPE7 1267 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 CCDC73Q6ZRK6 1079 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 DAW1Q8N136 415 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 URGCPQ8TCY9 931 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 KCNG4Q8TDN1 519 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 LARP4BQ92615 738 aaKnown RBP18.11■□□□□ 0.49
DNMT1-221ENST00000589538 EPSTI1Q96J88 318 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 CLIC6Q96NY7 704 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 ADPGKQ9BRR6 497 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 CCDC113Q9H0I3 377 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 TMEM134Q9H6X4 195 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 CWH43Q9H720 699 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 RSAD1Q9HA92 442 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 KMT5AQ9NQR1 393 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 LARSQ9P2J5 1176 aaKnown RBP18.11■□□□□ 0.49
DNMT1-221ENST00000589538 KANSL3Q9P2N6 904 aa18.11■□□□□ 0.49
DNMT1-221ENST00000589538 TFIP11Q9UBB9 837 aaKnown RBP18.11■□□□□ 0.49
DNMT1-221ENST00000589538 ZMYM2Q9UBW7 1377 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 B4GALT5O43286 388 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 PLS3P13797 630 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 UBE3AQ05086 875 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 MAPK7Q13164 816 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 CCDC85BQ15834 202 aaPredicted RBP18.1■□□□□ 0.49
DNMT1-221ENST00000589538 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 RRAGBQ5VZM2 374 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 GPBP1Q86WP2 473 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 COLGALT1Q8NBJ5 622 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 SPIRE2Q8WWL2 714 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 PPM1EQ8WY54 764 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 LPPQ93052 612 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 ZNF558Q96NG5 402 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 NTPCRQ9BSD7 190 aaKnown RBP18.1■□□□□ 0.49
DNMT1-221ENST00000589538 BLOC1S4Q9NUP1 217 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 ARHGAP28Q9P2N2 729 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 PLAGL2Q9UPG8 496 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 IPPQ9Y573 584 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 ATP6V1DQ9Y5K8 247 aa18.1■□□□□ 0.49
DNMT1-221ENST00000589538 PRRC2BQ5JSZ5 2229 aaKnown RBP18.09■□□□□ 0.49
DNMT1-221ENST00000589538 CUTAO60888 179 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 OFD1O75665 1012 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 BRD1O95696 1058 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 RNASELQ05823 741 aaKnown RBP18.09■□□□□ 0.49
DNMT1-221ENST00000589538 PKP1Q13835 747 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 MCM6Q14566 821 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 AGMOQ6ZNB7 445 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 THNSL1Q8IYQ7 743 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 KLHL23Q8NBE8 558 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 SLC17A8Q8NDX2 589 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 EIF2AQ9BY44 585 aaKnown RBP18.09■□□□□ 0.49
DNMT1-221ENST00000589538 POLD4Q9HCU8 107 aa18.09■□□□□ 0.49
DNMT1-221ENST00000589538 GIT1Q9Y2X7 761 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms