RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ASIC4Q96FT7 647 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 CCDC43Q96MW1 224 aaKnown RBP15.31■□□□□ 0.04
HDAC5-208ENST00000588419 NECTIN4Q96NY8 510 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 MTRQ99707 1265 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 APOL6Q9BWW8 343 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 ADAM7Q9H2U9 754 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 SMOC2Q9H3U7 446 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 MINDY3Q9H8M7 445 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 IFT122Q9HBG6 1241 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 FAM86C1Q9NVL1 165 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 DZANK1Q9NVP4 752 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 ORC3Q9UBD5 711 aaPredicted RBP15.31■□□□□ 0.04
HDAC5-208ENST00000588419 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
HDAC5-208ENST00000588419 C2CD2LO14523 706 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 ASGR2P07307 311 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 KRT2P35908 639 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 NR5A1Q13285 461 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 MTMR3Q13615 1198 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 EPHA7Q15375 998 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 PPP4R3AQ6IN85 833 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 TMC5Q6UXY8 1006 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 AGMOQ6ZNB7 445 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 OTUD6AQ7L8S5 288 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 TPH2Q8IWU9 490 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 FAM177A1Q8N128 213 aaPredicted RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 TCP11Q8WWU5 503 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 HAS1Q92839 578 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 CPB2Q96IY4 423 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 TRAIPQ9BWF2 469 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 DHX33Q9H6R0 707 aaKnown RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 BRMS1Q9HCU9 246 aa15.3■□□□□ 0.04
HDAC5-208ENST00000588419 PRG3Q9Y2Y8 225 aaPredicted RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 MTCL1Q9Y4B5 1905 aaKnown RBP15.3■□□□□ 0.04
HDAC5-208ENST00000588419 ZDBF2Q9HCK1 2354 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 ZBTB39O15060 712 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 PFKFB2O60825 505 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 DDHD2O94830 711 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 NEFLP07196 543 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 MYBP10242 640 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 KLRC2P26717 231 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 AFF1P51825 1210 aaKnown RBP15.29■□□□□ 0.04
HDAC5-208ENST00000588419 AK2P54819 239 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 GIT2Q14161 759 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 PTPN14Q15678 1187 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 KIAA1841Q6NSI8 718 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 FERMT3Q86UX7 667 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 EXOC8Q8IYI6 725 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 NECAB1Q8N987 351 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 RSPH1Q8WYR4 309 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 WASF1Q92558 559 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 VN1R3Q9BXE9 311 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 SORCS3Q9UPU3 1222 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
HDAC5-208ENST00000588419 CNTNAP2Q9UHC6 1331 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 CARNS1A5YM72 827 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 INO80B-WBP1J3KQ70 363 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 TBX3O15119 743 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 ZNF623O75123 536 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 CTDNEP1O95476 244 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 BRD1O95696 1058 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 ITGA4P13612 1032 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 OR1G1P47890 313 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 ATAT1Q5SQI0 421 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 UBXN11Q5T124 520 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 C4orf19Q8IY42 314 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 SLFN12Q8IYM2 578 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 PRRX2Q99811 253 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 EMILIN2Q9BXX0 1053 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 EIF2AQ9BY44 585 aaKnown RBP15.28■□□□□ 0.04
HDAC5-208ENST00000588419 ZSWIM4Q9H7M6 989 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 SFXN1Q9H9B4 322 aa15.28■□□□□ 0.04
HDAC5-208ENST00000588419 NRP1O14786 923 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 GAS2O43903 313 aaKnown RBP15.27■□□□□ 0.04
HDAC5-208ENST00000588419 LARGE1O95461 756 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 URODP06132 367 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 AVPR2P30518 371 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 MLH1P40692 756 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 TCF15Q12870 199 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 CALCRLQ16602 461 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 PPFIBP1Q86W92 1011 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 SLC22A17Q8WUG5 538 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 KLHL5Q96PQ7 755 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 EIF2AK1Q9BQI3 630 aaKnown RBP15.27■□□□□ 0.04
HDAC5-208ENST00000588419 TRIM6Q9C030 488 aaPredicted RBP15.27■□□□□ 0.04
HDAC5-208ENST00000588419 MFSD1Q9H3U5 465 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 LIMD1Q9UGP4 676 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 HES2Q9Y543 173 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 PPME1Q9Y570 386 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 IPPQ9Y573 584 aa15.27■□□□□ 0.04
HDAC5-208ENST00000588419 TRIP11Q15643 1979 aa15.26■□□□□ 0.03
HDAC5-208ENST00000588419 TSPAN1O60635 241 aa15.26■□□□□ 0.03
HDAC5-208ENST00000588419 ALDH2P05091 517 aa15.26■□□□□ 0.03
HDAC5-208ENST00000588419 NCLP19338 710 aaKnown RBP15.26■□□□□ 0.03
HDAC5-208ENST00000588419 HOXA11P31270 313 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms