RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 FAM161BQ96MY7 647 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 BLZF1Q9H2G9 400 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 C1orf112Q9NSG2 853 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 KBTBD4Q9NVX7 518 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 TBC1D7Q9P0N9 293 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 ODF2LQ9ULJ1 636 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 PCDHA11Q9Y5I1 949 aa13.92□□□□□ -0.18
RETREG3-203ENST00000585894 A0A1W2PQ27 194 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 A0A1W2PQ64 194 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 GADD45BO75293 160 aaPredicted RBP13.91□□□□□ -0.18
RETREG3-203ENST00000585894 NMT1P30419 496 aaKnown RBP13.91□□□□□ -0.18
RETREG3-203ENST00000585894 MAPK6Q16659 721 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
RETREG3-203ENST00000585894 ECHDC2Q86YB7 292 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 NPAS4Q8IUM7 802 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 YME1L1Q96TA2 773 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 TNMDQ9H2S6 317 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 TTYH1Q9H313 450 aaPredicted RBP13.91□□□□□ -0.18
RETREG3-203ENST00000585894 CERS4Q9HA82 394 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 PARVGQ9HBI0 331 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 FAM105AQ9NUU6 356 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 MSRAQ9UJ68 235 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 LRFN2Q9ULH4 789 aa13.91□□□□□ -0.18
RETREG3-203ENST00000585894 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 K7ENM7 598 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 K7ERI5 159 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 DGKIO75912 1065 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 SYKP43405 635 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 FAM189BP81408 668 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 HTRA4P83105 476 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 PRPF4BQ13523 1007 aaKnown RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 RAB30Q15771 203 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 TMEM132AQ24JP5 1023 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 NT5DC1Q5TFE4 455 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 EEF1DP3Q658K8 133 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 SPIRE2Q8WWL2 714 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 HPS3Q969F9 1004 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 FIZ1Q96SL8 496 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 RAD9AQ99638 391 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 C17orf75Q9HAS0 396 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 CHST12Q9NRB3 414 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 RNF19AQ9NV58 838 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 DACT1Q9NYF0 836 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 LARSQ9P2J5 1176 aaKnown RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 HES2Q9Y543 173 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 PCDHB2Q9Y5E7 798 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 PHLPP2Q6ZVD8 1323 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 A0A0U1RQF3 1178 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 FAM237AA0A1B0GTK4 181 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 TRAK2O60296 914 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 NPTXRO95502 500 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 MAPTP10636 758 aaKnown RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 EFNA5P52803 228 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 NCKAP1LP55160 1127 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 ASIC1P78348 528 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 FAM187BQ17R55 369 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 ZC2HC1CQ53FD0 456 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 NOTUMQ6P988 496 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 HAUS6Q7Z4H7 955 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 NTPCRQ9BSD7 190 aaKnown RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 IKZF4Q9H2S9 585 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 CUEDC2Q9H467 287 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 PDZD7Q9H5P4 517 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 RTN4Q9NQC3 1192 aaKnown RBP13.9□□□□□ -0.18
RETREG3-203ENST00000585894 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 MTUS1Q9ULD2 1270 aa13.9□□□□□ -0.18
RETREG3-203ENST00000585894 TRANK1O15050 2925 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 TRIP11Q15643 1979 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 GOLGA6L4A6NEF3 574 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 ACKR2O00590 384 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 SLFN14P0C7P3 912 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 STAG3L1P0CL83 205 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 SMTNP53814 917 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 CUL4BQ13620 913 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 FAM178BQ8IXR5 827 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 CEP57L1Q8IYX8 460 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 SMG8Q8ND04 991 aaKnown RBP13.89□□□□□ -0.19
RETREG3-203ENST00000585894 GLIS3Q8NEA6 775 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 TARS2Q9BW92 718 aaKnown RBP13.89□□□□□ -0.19
RETREG3-203ENST00000585894 APOL6Q9BWW8 343 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 NXF3Q9H4D5 531 aaKnown RBP13.89□□□□□ -0.19
RETREG3-203ENST00000585894 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
RETREG3-203ENST00000585894 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms