RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 UBA1P22314 1058 aaKnown RBP19.69■□□□□ 0.74
SMPD3-211ENST00000568373 SLC39A4Q6P5W5 647 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 ZC3H15Q8WU90 426 aaKnown RBP19.69■□□□□ 0.74
SMPD3-211ENST00000568373 L3MBTL3Q96JM7 780 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-211ENST00000568373 POLR3FQ9H1D9 316 aaPredicted RBP19.69■□□□□ 0.74
SMPD3-211ENST00000568373 AGTPBP1Q9UPW5 1226 aa19.69■□□□□ 0.74
SMPD3-211ENST00000568373 CNMDO75829 334 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 OATP04181 439 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 MXI1P50539 228 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 VSNL1P62760 191 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 ITIH3Q06033 890 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 PPIL2Q13356 520 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 TTLL12Q14166 644 aaPredicted RBP19.68■□□□□ 0.74
SMPD3-211ENST00000568373 EMC2Q15006 297 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 LONRF2Q1L5Z9 754 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 WDR93Q6P2C0 686 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 SLC30A5Q8TAD4 765 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 OLIG1Q8TAK6 271 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 SAAL1Q96ER3 474 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 PSMB7Q99436 277 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 SYT11Q9BT88 431 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 TMEM117Q9H0C3 514 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 ARHGAP28Q9P2N2 729 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 INTUQ9ULD6 942 aa19.68■□□□□ 0.74
SMPD3-211ENST00000568373 IGKV6D-21A0A0A0MT36 114 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 GRID2IPA4D2P6 1211 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 H0YCG3 227 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 ERLIN1O75477 346 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 CXCR5P32302 372 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 ABCD1P33897 745 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 POLGP54098 1239 aaPredicted RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 ARHGAP44Q17R89 818 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 BRDTQ58F21 947 aaPredicted RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 DPY19L2Q6NUT2 758 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 LNX1Q8TBB1 728 aaPredicted RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 VTI1AQ96AJ9 217 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 FBXL18Q96ME1 805 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 HNRNPDLO14979 420 aaKnown RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 FARP2O94887 1054 aaPredicted RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 H2AFZP0C0S5 128 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 IFI16Q16666 785 aaKnown RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 MEI1Q5TIA1 1274 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 H2AFVQ71UI9 128 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 U2AF1L4Q8WU68 220 aaKnown RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 UBE2TQ9NPD8 197 aaPredicted RBP19.67■□□□□ 0.74
SMPD3-211ENST00000568373 KCNG1Q9UIX4 513 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 USP20Q9Y2K6 914 aa19.67■□□□□ 0.74
SMPD3-211ENST00000568373 TARSL2A2RTX5 802 aaKnown RBP19.66■□□□□ 0.74
SMPD3-211ENST00000568373 FOXN3O00409 490 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-211ENST00000568373 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 SASH3O75995 380 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 SLC25A27O95847 323 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 FTCDO95954 541 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 EPHX2P34913 555 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 KIF22Q14807 665 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 BEND6Q5SZJ8 279 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-211ENST00000568373 TAS1R3Q7RTX0 852 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 GLYCTKQ8IVS8 523 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 ARHGEF19Q8IW93 802 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 PARD3BQ8TEW8 1205 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 POMGNT1Q8WZA1 660 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 FUT8Q9BYC5 575 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 DHX33Q9H6R0 707 aaKnown RBP19.66■□□□□ 0.74
SMPD3-211ENST00000568373 LRRC37A2A6NM11 1700 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 A0A0A6YYK5 440 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-211ENST00000568373 LRRN2O75325 713 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 TGFB3P10600 412 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 C2orf54Q08AI8 447 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 NEDD9Q14511 834 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 CCDC181Q5TID7 509 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 DNAAF5Q86Y56 855 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 MFSD14AQ96MC6 490 aa19.66■□□□□ 0.74
SMPD3-211ENST00000568373 NIFKQ9BYG3 293 aaKnown RBP19.66■□□□□ 0.74
SMPD3-211ENST00000568373 RNF216Q9NWF9 866 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-211ENST00000568373 GSTTP1A0A1W2PQM5 241 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 GARTP22102 1010 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 MOGSQ13724 837 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMPD3-211ENST00000568373 SPATA4Q8NEY3 305 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 TMC2Q8TDI7 906 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 CCDC127Q96BQ5 260 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 OPTNQ96CV9 577 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 PORCNQ9H237 461 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 R3HDMLQ9H3Y0 253 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 TXNRD2Q9NNW7 524 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 RNF14Q9UBS8 474 aa19.65■□□□□ 0.74
SMPD3-211ENST00000568373 LRRIQ3A6PVS8 624 aaPredicted RBP19.64■□□□□ 0.74
SMPD3-211ENST00000568373 COPB2P35606 906 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 PAFAH1B1P43034 410 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 NOP2P46087 812 aaKnown RBP19.64■□□□□ 0.74
SMPD3-211ENST00000568373 KRT39Q6A163 491 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 USP37Q86T82 979 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 MMGT1Q8N4V1 131 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 KCNN1Q92952 543 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 BICD1Q96G01 975 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 PCYT2Q99447 389 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 TMEM8AQ9HCN3 771 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 ABCB6Q9NP58 842 aa19.64■□□□□ 0.74
SMPD3-211ENST00000568373 MCM3P25205 808 aa19.64■□□□□ 0.73
SMPD3-211ENST00000568373 PLA2G4AP47712 749 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms