RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 RNF43Q68DV7 783 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 ZDHHC24Q6UX98 284 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 DYNLL2Q96FJ2 89 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 BICD1Q96G01 975 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 ELAC2Q9BQ52 826 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 MMTAG2Q9BU76 263 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PACSIN1Q9BY11 444 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 YIPF3Q9GZM5 350 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 NSRP1Q9H0G5 558 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 GANQ9H2C0 597 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 MMRN2Q9H8L6 949 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 MROH7Q68CQ1 1323 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 hCG_1642624A0A1W2PR95 340 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 CCDC169A6NNP5 214 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 NMT2O60551 498 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 SNHG28P0DPA3 235 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 VEGFAP15692 232 aaPredicted RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 ACADSP16219 412 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 CDC25CP30307 473 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 CDK8P49336 464 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 SCNN1DP51172 638 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PTENP60484 403 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 C6orf118Q5T5N4 469 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 OR52E8Q6IFG1 317 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 UNC13DQ70J99 1090 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 IRF2BP2Q7Z5L9 587 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 SDCCAG8Q86SQ7 713 aaPredicted RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 MAPKAPK5Q8IW41 473 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 SLC44A5Q8NCS7 719 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TPCN2Q8NHX9 752 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TAF4BQ92750 862 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TMEM237Q96Q45 408 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PRMT1Q99873 361 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TMX4Q9H1E5 349 aaPredicted RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TAOK3Q9H2K8 898 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 MCM9Q9NXL9 1143 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 INTUQ9ULD6 942 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PCDHA6Q9UN73 950 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 RPL26L1Q9UNX3 145 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 DIS3Q9Y2L1 958 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PCDHA8Q9Y5H6 950 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PCDHA3Q9Y5H8 950 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 RPTORQ8N122 1335 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 SIGLEC16A6NMB1 481 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TTI1O43156 1089 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 MAP3K13O43283 966 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 RNF8O76064 485 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 GNAT1P11488 350 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 ITGA4P13612 1032 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 CALB2P22676 271 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 ALDH3A1P30838 453 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 UBA7P41226 1012 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TUBP50607 506 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 NLRP5P59047 1200 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 FOXK1P85037 733 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 CXCL9Q07325 125 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 ADAM9Q13443 819 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 IFIT1BQ5T764 474 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 NUGGCQ68CJ6 796 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 GALNT17Q6IS24 598 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 NT5DC3Q86UY8 548 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 CABP7Q86V35 215 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 FITM2Q8N6M3 262 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 OLIG1Q8TAK6 271 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TBC1D5Q92609 795 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 IFT74Q96LB3 600 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 FMO2Q99518 471 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 TSC22D3Q99576 134 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 DDX47Q9H0S4 455 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 RIC8AQ9NPQ8 531 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 INTS9Q9NV88 658 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 RGL1Q9NZL6 768 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 NKX1-2Q9UD57 310 aaPredicted RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 AMACRQ9UHK6 382 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 LCTP09848 1927 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 COL11A1P12107 1806 aaPredicted RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 FAM187AA6NFU0 413 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 EVI5O60447 810 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 PEX11AO75192 247 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ENTPD3O75355 529 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 PRKCIP41743 596 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 PMS2P54278 862 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 IFI35P80217 286 aaPredicted RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 AMPD3Q01432 767 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 PSMD2Q13200 908 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ORC2Q13416 577 aaPredicted RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 TAF11Q15544 211 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 PPP2R5EQ16537 467 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 SPDYAQ5MJ70 313 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 DGKHQ86XP1 1220 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 NEDD1Q8NHV4 660 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 NEK9Q8TD19 979 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 EEF2KMTQ96G04 330 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 PRMT6Q96LA8 375 aaPredicted RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 TRAPPC9Q96Q05 1148 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 SYT15Q9BQS2 421 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 AP1M1Q9BXS5 423 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms