RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 VAV3Q9UKW4 847 aa9.38□□□□□ -0.91
RPUSD4-209ENST00000534393 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
RPUSD4-209ENST00000534393 INPP5FQ9Y2H2 1132 aa9.38□□□□□ -0.91
RPUSD4-209ENST00000534393 PCDHB2Q9Y5E7 798 aa9.38□□□□□ -0.91
RPUSD4-209ENST00000534393 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
RPUSD4-209ENST00000534393 TMEM150BA6NC51 233 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 EML1O00423 815 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 SLC37A4O43826 429 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 ERLIN2O94905 339 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 SRGAP2CP0DJJ0 459 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 AXLP30530 894 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 LAMTOR4Q0VGL1 99 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 TFDP1Q14186 410 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 PLA2G4FQ68DD2 849 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 KIAA1841Q6NSI8 718 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 CABP7Q86V35 215 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 ZDHHC14Q8IZN3 488 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 TDRD5Q8NAT2 981 aaKnown RBP9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 PRPF31Q8WWY3 499 aaKnown RBP9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 LPPQ93052 612 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 ACSF2Q96CM8 615 aaPredicted RBP9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 CCDC51Q96ER9 411 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 SH2D3AQ9BRG2 576 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 APOL5Q9BWW9 433 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 GBP3Q9H0R5 595 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 POMKQ9H5K3 350 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 RSAD1Q9HA92 442 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 BRMS1Q9HCU9 246 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 DBR1Q9UK59 544 aaKnown RBP9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 KCNJ14Q9UNX9 436 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 FAN1Q9Y2M0 1017 aa9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 RIF1Q5UIP0 2472 aaKnown RBP9.37□□□□□ -0.91
RPUSD4-209ENST00000534393 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 PFKFB2O60825 505 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 NR1I2O75469 434 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 AVPR2P30518 371 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 NPEPPSP55786 919 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 ANAPC15P60006 121 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 POU5F1BQ06416 359 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 SCRN1Q12765 414 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 EMC2Q15006 297 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 XKR9Q5GH70 373 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 RARS2Q5T160 578 aaKnown RBP9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 IER5LQ5T953 404 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 CYP26C1Q6V0L0 522 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 AGMOQ6ZNB7 445 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 PIK3AP1Q6ZUJ8 805 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 FERMT3Q86UX7 667 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 HACE1Q8IYU2 909 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 RNF149Q8NC42 400 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 PRSS33Q8NF86 280 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 SLC22A17Q8WUG5 538 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 TMEM143Q96AN5 459 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 AIFM3Q96NN9 605 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 MTRQ99707 1265 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 LARP6Q9BRS8 491 aaKnown RBP9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 LXNQ9BS40 222 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 SFXN1Q9H9B4 322 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 MRPL17Q9NRX2 175 aaKnown RBP9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 DNAJB4Q9UDY4 337 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 PCDHA12Q9UN75 941 aa9.36□□□□□ -0.91
RPUSD4-209ENST00000534393 DOCK8Q8NF50 2099 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 C2CD4DB7Z1M9 353 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 DGAT1O75907 488 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 C1RP00736 705 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 XRCC6P12956 609 aaKnown RBP eCLIP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 ITGA4P13612 1032 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 EPCAMP16422 314 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 SP100P23497 879 aaPredicted RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 KLRC2P26717 231 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 HOXA11P31270 313 aaPredicted RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 KRT2P35908 639 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 SLC11A1P49279 550 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 PTPN14Q15678 1187 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 LONRF3Q496Y0 759 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 NCAPH2Q6IBW4 605 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 NOTUMQ6P988 496 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 C15orf39Q6ZRI6 1047 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 OTOP3Q7RTS5 596 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 GPR149Q86SP6 731 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 TMEM173Q86WV6 379 aaPredicted RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 ZNF280BQ86YH2 543 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 IFNLR1Q8IU57 520 aaPredicted RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 AUTS2Q8WXX7 1259 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 HAS1Q92839 578 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 CCDC43Q96MW1 224 aaKnown RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 IPO9Q96P70 1041 aaKnown RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 ANKEF1Q9NU02 776 aa9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 ZFHX2Q9C0A1 2572 aaPredicted RBP9.35□□□□□ -0.91
RPUSD4-209ENST00000534393 PLXNA3P51805 1871 aa9.34□□□□□ -0.91
RPUSD4-209ENST00000534393 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
RPUSD4-209ENST00000534393 NRP1O14786 923 aa9.34□□□□□ -0.91
RPUSD4-209ENST00000534393 INPPL1O15357 1258 aa9.34□□□□□ -0.91
RPUSD4-209ENST00000534393 ST18O60284 1047 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms