RNA–Protein interactions for RNA: ENST00000494966.1

NIPSNAP1-205, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-205ENST00000494966 ASAP3Q8TDY4 903 aa13.9□□□□□ -0.18
NIPSNAP1-205ENST00000494966 NACC1Q96RE7 527 aa13.9□□□□□ -0.18
NIPSNAP1-205ENST00000494966 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
NIPSNAP1-205ENST00000494966 POLR3CQ9BUI4 534 aaPredicted RBP13.9□□□□□ -0.18
NIPSNAP1-205ENST00000494966 GBP3Q9H0R5 595 aa13.9□□□□□ -0.18
NIPSNAP1-205ENST00000494966 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
NIPSNAP1-205ENST00000494966 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.19
NIPSNAP1-205ENST00000494966 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 TSPAN1O60635 241 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MED24O75448 989 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 EYA4O95677 639 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 COL9A1P20849 921 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 AXLP30530 894 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 CA8P35219 290 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ARL2P36404 184 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 RBM10P98175 930 aaKnown RBP13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 POU5F1BQ06416 359 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 UBXN11Q5T124 520 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 HAUS3Q68CZ6 603 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 POTEGQ6S5H5 508 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MRPL10Q7Z7H8 261 aaKnown RBP13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 CNNM3Q8NE01 707 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MCPH1Q8NEM0 835 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 CCDC51Q96ER9 411 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 RSAD1Q9HA92 442 aa13.89□□□□□ -0.19
NIPSNAP1-205ENST00000494966 PI4K2BG5E9Z4 385 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ALADP13716 330 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 NCLP19338 710 aaKnown RBP13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 GLRA2P23416 452 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 RPA1P27694 616 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MBTD1Q05BQ5 628 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 NBR1Q14596 966 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 TMEM31Q5JXX7 168 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 LLGL2Q6P1M3 1020 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 AGMOQ6ZNB7 445 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MAEAQ7L5Y9 396 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MRPL43Q8N983 215 aaKnown RBP13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 VN1R2Q8NFZ6 395 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 CPB2Q96IY4 423 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 FAM193BQ96PV7 902 aaPredicted RBP13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 NFKBIZQ9BYH8 718 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 TRIM6Q9C030 488 aaPredicted RBP13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 NRDE2Q9H7Z3 1164 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 UBN1Q9NPG3 1134 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 KANSL3Q9P2N6 904 aa13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ARHGEF35A5YM69 484 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 LRRIQ4A6NIV6 560 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 GALTP07902 379 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ITGA4P13612 1032 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 TMEM173Q86WV6 379 aaPredicted RBP13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ZNF280BQ86YH2 543 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 VPS52Q8N1B4 723 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 SMG8Q8ND04 991 aaKnown RBP13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 IGSF21Q96ID5 467 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 EIF2AQ9BY44 585 aaKnown RBP13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 CSRNP2Q9H175 543 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 GPRC5CQ9NQ84 441 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 DNAJB4Q9UDY4 337 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 LRWD1Q9UFC0 647 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 IPPQ9Y573 584 aa13.87□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 B4GALT5O43286 388 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 DCXO43602 365 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 CXCL14O95715 111 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 POMCP01189 267 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ARF4P18085 180 aaPredicted RBP13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MUTP22033 750 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 CCT6AP40227 531 aaKnown RBP13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 SLC11A1P49279 550 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 AFF1P51825 1210 aaKnown RBP13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 PTGDRQ13258 359 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 AMHR2Q16671 573 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MCTP1Q6DN14 999 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 PADI6Q6TGC4 694 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 TMEM184AQ6ZMB5 413 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 DDX53Q86TM3 631 aaKnown RBP13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ZBTB8OSQ8IWT0 167 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 C4orf32Q8N8J7 132 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 TMX3Q96JJ7 454 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 LRFN3Q9BTN0 628 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 APOL6Q9BWW8 343 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 RAB34Q9BZG1 259 aa13.86□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ARL5CA6NH57 179 aa13.85□□□□□ -0.19
NIPSNAP1-205ENST00000494966 B4GALT3O60512 393 aa13.85□□□□□ -0.19
NIPSNAP1-205ENST00000494966 GPR37L1O60883 481 aa13.85□□□□□ -0.19
NIPSNAP1-205ENST00000494966 DDHD2O94830 711 aa13.85□□□□□ -0.19
NIPSNAP1-205ENST00000494966 ALDH2P05091 517 aa13.85□□□□□ -0.19
NIPSNAP1-205ENST00000494966 MLH1P40692 756 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms