RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ARHGAP28Q9P2N2 729 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 KCNG1Q9UIX4 513 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 KCNH3Q9ULD8 1083 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 HPSEQ9Y251 543 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 SZT2Q5T011 3432 aa14.94□□□□□ -0.02
COL1A1-208ENST00000494334 A0A1B0GUA9 196 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 A0A1W2PQ27 194 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 A0A1W2PQ64 194 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 A0A1W2PQD8 194 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 K7ERI5 159 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 ACKR2O00590 384 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 ZNF623O75123 536 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 FAM13AO94988 1023 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 EOMESO95936 686 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 PRKCBP05771 671 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 PFKFB1P16118 471 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 ATF7P17544 494 aaPredicted RBP14.93□□□□□ -0.02
COL1A1-208ENST00000494334 LIG1P18858 919 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 SMTNP53814 917 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 TAP1Q03518 808 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 PPP2R2DQ66LE6 453 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 NOTUMQ6P988 496 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 TAS1R3Q7RTX0 852 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 MYCT1Q8N699 235 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 STAMQ92783 540 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 DNAJC19Q96DA6 116 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 TNMDQ9H2S6 317 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 ZHX3Q9H4I2 956 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 PARVGQ9HBI0 331 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 KBTBD4Q9NVX7 518 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
COL1A1-208ENST00000494334 USP20Q9Y2K6 914 aa14.93□□□□□ -0.02
COL1A1-208ENST00000494334 FAM237AA0A1B0GTK4 181 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 LINC01553A4QN01 128 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 TRAK2O60296 914 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 TBCAO75347 108 aaKnown RBP14.92□□□□□ -0.02
COL1A1-208ENST00000494334 FGFR1P11362 822 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 SKIP12755 728 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 GATMP50440 423 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 RAB27AP51159 221 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 NCKAP1LP55160 1127 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 PRPF4BQ13523 1007 aaKnown RBP14.92□□□□□ -0.02
COL1A1-208ENST00000494334 TPRNQ4KMQ1 711 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 NT5DC1Q5TFE4 455 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 SPRED2Q7Z698 418 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 CDR2LQ86X02 465 aaPredicted RBP14.92□□□□□ -0.02
COL1A1-208ENST00000494334 TMEM161BQ8NDZ6 487 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 CCDC51Q96ER9 411 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 FAM161BQ96MY7 647 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
COL1A1-208ENST00000494334 FIZ1Q96SL8 496 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 PYM1Q9BRP8 204 aaKnown RBP14.92□□□□□ -0.02
COL1A1-208ENST00000494334 EIF2AQ9BY44 585 aaKnown RBP14.92□□□□□ -0.02
COL1A1-208ENST00000494334 RNF19AQ9NV58 838 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 SERTAD1Q9UHV2 236 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 PCDHB2Q9Y5E7 798 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 PHLPP2Q6ZVD8 1323 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
COL1A1-208ENST00000494334 BTG3Q14201 252 aaPredicted RBP14.91□□□□□ -0.02
COL1A1-208ENST00000494334 LONRF3Q496Y0 759 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 SLC27A1Q6PCB7 646 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 HAUS6Q7Z4H7 955 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 MRPL10Q7Z7H8 261 aaKnown RBP14.91□□□□□ -0.02
COL1A1-208ENST00000494334 FIBCD1Q8N539 461 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 DEFB123Q8N688 67 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 RNF169Q8NCN4 708 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 SMG8Q8ND04 991 aaKnown RBP14.91□□□□□ -0.02
COL1A1-208ENST00000494334 KCNN1Q92952 543 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 LPPQ93052 612 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 LRRC27Q9C0I9 530 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 MAGEF1Q9HAY2 307 aa14.91□□□□□ -0.02
COL1A1-208ENST00000494334 TCHHQ07283 1943 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 LAMA2P24043 3122 aaKnown RBP14.9□□□□□ -0.02
COL1A1-208ENST00000494334 FRMD3A2A2Y4 597 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 TBKBP1A7MCY6 615 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 MEIS3P2A8K0S8 358 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 HOXA2O43364 376 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 ACTN4O43707 911 aaKnown RBP14.9□□□□□ -0.02
COL1A1-208ENST00000494334 SLFN14P0C7P3 912 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 MAPTP10636 758 aaKnown RBP14.9□□□□□ -0.02
COL1A1-208ENST00000494334 NMT1P30419 496 aaKnown RBP14.9□□□□□ -0.02
COL1A1-208ENST00000494334 NDUFA8P51970 172 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 AMPD3Q01432 767 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 GRIN2CQ14957 1233 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 PAN2Q504Q3 1202 aaKnown RBP14.9□□□□□ -0.02
COL1A1-208ENST00000494334 FAM178BQ8IXR5 827 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 CMTR2Q8IYT2 770 aaKnown RBP14.9□□□□□ -0.02
COL1A1-208ENST00000494334 FSIP1Q8NA03 581 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 CNNM3Q8NE01 707 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 MRPS27Q92552 414 aaKnown RBP14.9□□□□□ -0.02
COL1A1-208ENST00000494334 PGBD4Q96DM1 585 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 CASD1Q96PB1 797 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 TRIM9Q9C026 710 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 GOLPH3LQ9H4A5 285 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 PDZD7Q9H5P4 517 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 CERS4Q9HA82 394 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 MTMR10Q9NXD2 777 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 IPPQ9Y573 584 aa14.9□□□□□ -0.02
COL1A1-208ENST00000494334 H0YCG3 227 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 K7ENM7 598 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms