RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 LLGL2Q6P1M3 1020 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 DDX53Q86TM3 631 aaKnown RBP10.5□□□□□ -0.73
NUP50-215ENST00000484186 IFNLR1Q8IU57 520 aaPredicted RBP10.5□□□□□ -0.73
NUP50-215ENST00000484186 CNNM3Q8NE01 707 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 URGCPQ8TCY9 931 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 PIGOQ8TEQ8 1089 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 SUSD6Q92537 303 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 IGSF21Q96ID5 467 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 C8orf76Q96K31 380 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 ZSCAN31Q96LW9 406 aaPredicted RBP10.5□□□□□ -0.73
NUP50-215ENST00000484186 TMEM60Q9H2L4 133 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 RSAD1Q9HA92 442 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 KANSL3Q9P2N6 904 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 CNTNAP2Q9UHC6 1331 aa10.5□□□□□ -0.73
NUP50-215ENST00000484186 A0A087WWV3 80 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 POTEMA6NI47 508 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 CLASP2O75122 1294 aaKnown RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 DDHD2O94830 711 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 ALDH2P05091 517 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 NCLP19338 710 aaKnown RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 CA8P35219 290 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 ARL2P36404 184 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 RARRES1P49788 294 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 HMGN5P82970 282 aaKnown RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 NCBP1Q09161 790 aaKnown RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 GIT2Q14161 759 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 SYCE2Q6PIF2 218 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 TMEM173Q86WV6 379 aaPredicted RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 ZNF280BQ86YH2 543 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 VPS52Q8N1B4 723 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 ASAP3Q8TDY4 903 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 CASP10Q92851 521 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 FAM122AQ96E09 287 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 CCDC43Q96MW1 224 aaKnown RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 FAM193BQ96PV7 902 aaPredicted RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 GBP3Q9H0R5 595 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 ZBP1Q9H171 429 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 FOXP1Q9H334 677 aaPredicted RBP10.49□□□□□ -0.73
NUP50-215ENST00000484186 TUFT1Q9NNX1 390 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 UBN1Q9NPG3 1134 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 DNAJB4Q9UDY4 337 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 MUTYHQ9UIF7 546 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 HCFC2Q9Y5Z7 792 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 IRAK3Q9Y616 596 aa10.49□□□□□ -0.73
NUP50-215ENST00000484186 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 TSPAN1O60635 241 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 CTSAP10619 480 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 ITGA4P13612 1032 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 GLRA2P23416 452 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 PLA2G5P39877 138 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 SLC11A1P49279 550 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 AFF1P51825 1210 aaKnown RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 MBTD1Q05BQ5 628 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 ORC2Q13416 577 aaPredicted RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 CAPSQ13938 189 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 ZNF174Q15697 407 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 TPRNQ4KMQ1 711 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 NOTUMQ6P988 496 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 CATSPER3Q86XQ3 398 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 FAM184AQ8NB25 1140 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 TMEM87AQ8NBN3 555 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 SMG8Q8ND04 991 aaKnown RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 FBXO18Q8NFZ0 1043 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 BCL7CQ8WUZ0 217 aaPredicted RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 AUTS2Q8WXX7 1259 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 EDAQ92838 391 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 CCDC51Q96ER9 411 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 CPB2Q96IY4 423 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 RPGRIP1Q96KN7 1286 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 KIF2CQ99661 725 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 TMEM175Q9BSA9 504 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 POLR3CQ9BUI4 534 aaPredicted RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 EIF2AQ9BY44 585 aaKnown RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 NFKBIZQ9BYH8 718 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 CSRNP2Q9H175 543 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 SH2B1Q9NRF2 756 aaPredicted RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 STK39Q9UEW8 545 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 DBR1Q9UK59 544 aaKnown RBP10.48□□□□□ -0.73
NUP50-215ENST00000484186 FAN1Q9Y2M0 1017 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 IPPQ9Y573 584 aa10.48□□□□□ -0.73
NUP50-215ENST00000484186 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.47□□□□□ -0.73
NUP50-215ENST00000484186 NRP1O14786 923 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 B4GALT3O60512 393 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 USO1O60763 962 aaKnown RBP10.47□□□□□ -0.73
NUP50-215ENST00000484186 MED24O75448 989 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 POMCP01189 267 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 OR52Z1P0C646 297 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 ARF4P18085 180 aaPredicted RBP10.47□□□□□ -0.73
NUP50-215ENST00000484186 RBM25P49756 843 aaKnown RBP10.47□□□□□ -0.73
NUP50-215ENST00000484186 ITIH3Q06033 890 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 GNL2Q13823 731 aaKnown RBP10.47□□□□□ -0.73
NUP50-215ENST00000484186 AMHR2Q16671 573 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 C8orf34Q49A92 452 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 ERMNQ8TAM6 284 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 NACC1Q96RE7 527 aa10.47□□□□□ -0.73
NUP50-215ENST00000484186 POLR3FQ9H1D9 316 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms