RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ADAM7Q9H2U9 754 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 TTC12Q9H892 705 aaPredicted RBP14.82□□□□□ -0.04
CPSF4-210ENST00000469897 BRMS1Q9HCU9 246 aa14.82□□□□□ -0.04
CPSF4-210ENST00000469897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-210ENST00000469897 WNT7AO00755 349 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 B4GALT3O60512 393 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 SEC24BO95487 1268 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 POMCP01189 267 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 WEE2P0C1S8 567 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 CALCRLQ16602 461 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 BMP8AQ7Z5Y6 402 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 ALYREFQ86V81 257 aaKnown RBP14.81□□□□□ -0.04
CPSF4-210ENST00000469897 DIS3L2Q8IYB7 885 aaKnown RBP14.81□□□□□ -0.04
CPSF4-210ENST00000469897 RSPH1Q8WYR4 309 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 MTRQ99707 1265 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 RNF39Q9H2S5 420 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 RSAD1Q9HA92 442 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 XPNPEP1Q9NQW7 623 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
CPSF4-210ENST00000469897 NRP1O14786 923 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 GAS2O43903 313 aaKnown RBP14.8□□□□□ -0.04
CPSF4-210ENST00000469897 SSBP05455 408 aaKnown RBP eCLIP14.8□□□□□ -0.04
CPSF4-210ENST00000469897 CTSAP10619 480 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 EPCAMP16422 314 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 ATP2B1P20020 1258 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 CES5AQ6NT32 575 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 SMG8Q8ND04 991 aaKnown RBP14.8□□□□□ -0.04
CPSF4-210ENST00000469897 URGCPQ8TCY9 931 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 PIGOQ8TEQ8 1089 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 FAM193BQ96PV7 902 aaPredicted RBP14.8□□□□□ -0.04
CPSF4-210ENST00000469897 VN1R3Q9BXE9 311 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 EIF2AQ9BY44 585 aaKnown RBP14.8□□□□□ -0.04
CPSF4-210ENST00000469897 KANSL3Q9P2N6 904 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 FAN1Q9Y2M0 1017 aa14.8□□□□□ -0.04
CPSF4-210ENST00000469897 INO80B-WBP1J3KQ70 363 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 TSPAN1O60635 241 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 ERLIN2O94905 339 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 LYPLA2O95372 231 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 ITGA4P13612 1032 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
CPSF4-210ENST00000469897 ARL2P36404 184 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 PTENP60484 403 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 ITIH3Q06033 890 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 NCBP1Q09161 790 aaKnown RBP14.79□□□□□ -0.04
CPSF4-210ENST00000469897 TRIM29Q14134 588 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 GIT2Q14161 759 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 MXD4Q14582 209 aaPredicted RBP14.79□□□□□ -0.04
CPSF4-210ENST00000469897 RARS2Q5T160 578 aaKnown RBP14.79□□□□□ -0.04
CPSF4-210ENST00000469897 IER5LQ5T953 404 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 ZBTB33Q86T24 672 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 SLC22A17Q8WUG5 538 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 CPB2Q96IY4 423 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 MTMR9Q96QG7 549 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 POMKQ9H5K3 350 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 ANKEF1Q9NU02 776 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 HES2Q9Y543 173 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 IRAK3Q9Y616 596 aa14.79□□□□□ -0.04
CPSF4-210ENST00000469897 CARNS1A5YM72 827 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 NEMFO60524 1076 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 KLRC2P26717 231 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 GUCY1B3Q02153 619 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 NHLH1Q02575 133 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 POU5F1BQ06416 359 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 SIGLEC14Q08ET2 396 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 PTPN21Q16825 1174 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 ATAT1Q5SQI0 421 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 MAEAQ7L5Y9 396 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 TAS1R1Q7RTX1 841 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 CNNM3Q8NE01 707 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 FEZF2Q8TBJ5 459 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 ASAP3Q8TDY4 903 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 KLHL5Q96PQ7 755 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 KCNH6Q9H252 994 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 UBN1Q9NPG3 1134 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 MIOSQ9NXC5 875 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 NR2E1Q9Y466 385 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 IPPQ9Y573 584 aa14.78□□□□□ -0.04
CPSF4-210ENST00000469897 EVPLQ92817 2033 aa14.77□□□□□ -0.04
CPSF4-210ENST00000469897 CNTNAP2Q9UHC6 1331 aa14.77□□□□□ -0.04
CPSF4-210ENST00000469897 C2CD4DB7Z1M9 353 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 DGAT1O75907 488 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 GLRA2P23416 452 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 AXLP30530 894 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 MCM7P33993 719 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 MTHFRP42898 656 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 OR1G1P47890 313 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 RARRES1P49788 294 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 ST3GAL1Q11201 340 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 TFDP1Q14186 410 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 PTPN14Q15678 1187 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 NOTUMQ6P988 496 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 TMC5Q6UXY8 1006 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 CABP7Q86V35 215 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 SUGP1Q8IWZ8 645 aaKnown RBP14.77□□□□□ -0.05
CPSF4-210ENST00000469897 ASIC4Q96FT7 647 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 RIPOR3Q96MK2 946 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 NECTIN4Q96NY8 510 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 GAD1Q99259 594 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 TMEM175Q9BSA9 504 aa14.77□□□□□ -0.05
CPSF4-210ENST00000469897 APOL6Q9BWW8 343 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms