RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PODXLO00592 558 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 RASGRF2O14827 1237 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 SNX3O60493 162 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 UBOX5O94941 541 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 FAM13AO94988 1023 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 SERPINB2P05120 415 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 RIPK1Q13546 671 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 C1orf186Q6ZWK4 172 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 PNMA8AQ86V59 439 aaPredicted RBP14□□□□□ -0.17
PDZRN3-205ENST00000466780 EXOC3L1Q86VI1 746 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 CPNE8Q86YQ8 564 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 RHOT2Q8IXI1 618 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 LMO3Q8TAP4 145 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 RBM17Q96I25 401 aaKnown RBP14□□□□□ -0.17
PDZRN3-205ENST00000466780 CTTNBP2NLQ9P2B4 639 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 MTRF1LQ9UGC7 380 aaKnown RBP14□□□□□ -0.17
PDZRN3-205ENST00000466780 GGT7Q9UJ14 662 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 CD2APQ9Y5K6 639 aa14□□□□□ -0.17
PDZRN3-205ENST00000466780 MIF4GDA9UHW6 222 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 RPSAP08865 295 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 RARGP13631 454 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 HSPA6P17066 643 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 MYL7Q01449 175 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CERS5Q8N5B7 392 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 ART4Q93070 314 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CCDC113Q9H0I3 377 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 DNAJC18Q9H819 358 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 AGPAT3Q9NRZ7 376 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 BCS1LQ9Y276 419 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CFAP73A6NFT4 308 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 FTLP02792 175 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 RARAP10276 462 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 PYGMP11217 842 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 EEF2P13639 858 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 COMTP21964 271 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CIITAP33076 1130 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 NCALDP61601 193 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 KCNJ2P63252 427 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 LRRC14Q15048 493 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CRELD2Q6UXH1 353 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 UBL4BQ8N7F7 174 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 HSD17B14Q9BPX1 270 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 EBF2Q9HAK2 575 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 ECM2O94769 699 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CREB1P16220 341 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 GBP1P32455 592 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CLNS1AP54105 237 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 ZNF268Q14587 947 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 SIX1Q15475 284 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 ZNF568Q3ZCX4 644 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 USH1GQ495M9 461 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 MFSD5Q6N075 450 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 CROCCP2Q86T23 111 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 KIRREL3Q8IZU9 778 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 PARP2Q9UGN5 583 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 L3MBTL1Q9Y468 752 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 STK24Q9Y6E0 443 aa13.99□□□□□ -0.17
PDZRN3-205ENST00000466780 FAM196BA6NMK8 535 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 KCNJ1P48048 391 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 SLMAPQ14BN4 828 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 TCEAL1Q15170 157 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 CYP1B1Q16678 543 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 ZNF746Q6NUN9 644 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 ZNF720Q7Z2F6 126 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 ZFPM1Q8IX07 1006 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 DDX23Q9BUQ8 820 aaKnown RBP13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 PARVGQ9HBI0 331 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 PTPN22Q9Y2R2 807 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 PFASO15067 1338 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 TP73O15350 636 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 SLITRK3O94933 977 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 GYS1P13807 737 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 PDE6CP51160 858 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 NFIAQ12857 509 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 MESDQ14696 234 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 CRYMQ14894 314 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 PPP2R5AQ15172 486 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 LONRF1Q17RB8 773 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 GALNTL6Q49A17 601 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 SIAH1Q8IUQ4 282 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 ARHGEF19Q8IW93 802 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 CD101Q93033 1021 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 POP1Q99575 1024 aaKnown RBP13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 AMNQ9BXJ7 453 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 FGFR1OP2Q9NVK5 253 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 FRMD4BQ9Y2L6 1034 aa13.98□□□□□ -0.17
PDZRN3-205ENST00000466780 ADAMTSL1Q8N6G6 1762 aa13.97□□□□□ -0.17
PDZRN3-205ENST00000466780 GGPS1O95749 300 aa13.97□□□□□ -0.17
PDZRN3-205ENST00000466780 NQO1P15559 274 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-205ENST00000466780 DLG4P78352 724 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms