RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 COX16Q9P0S2 106 aa14.93□□□□□ -0.02
SMTN-213ENST00000460658 NCOA3Q9Y6Q9 1424 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 GOLGA8IPA6NC78 632 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 GOLGA8JA6NMD2 632 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 GSTA4O15217 222 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 SDC4P31431 198 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 E4F1Q66K89 784 aaPredicted RBP14.92□□□□□ -0.02
SMTN-213ENST00000460658 ADGRF4Q8IZF3 695 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 C7orf31Q8N865 590 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 PIGOQ8TEQ8 1089 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 FAM84BQ96KN1 310 aaPredicted RBP14.92□□□□□ -0.02
SMTN-213ENST00000460658 AGPAT1Q99943 283 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 SUN2Q9UH99 717 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 USP17L10C9JJH3 530 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 PPP1R12AO14974 1030 aaPredicted RBP14.92□□□□□ -0.02
SMTN-213ENST00000460658 SRGAP2O75044 1071 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 BRAFP15056 766 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 CCDC137Q6PK04 289 aaKnown RBP14.92□□□□□ -0.02
SMTN-213ENST00000460658 CCDC138Q96M89 665 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 DENND3A2RUS2 1198 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 APOEP02649 317 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 HSPA9P38646 679 aaKnown RBP14.92□□□□□ -0.02
SMTN-213ENST00000460658 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 USP6NLQ92738 828 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 XPAP23025 273 aaPredicted RBP14.92□□□□□ -0.02
SMTN-213ENST00000460658 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
SMTN-213ENST00000460658 EIF2AK1Q9BQI3 630 aaKnown RBP14.92□□□□□ -0.02
SMTN-213ENST00000460658 PPP1R37O75864 691 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 ABL1P00519 1130 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 RPSAP08865 295 aaKnown RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 MAPRE2Q15555 327 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 APOL6Q9BWW8 343 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 ROPN1BQ9BZX4 212 aaPredicted RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 ROPN1Q9HAT0 212 aaPredicted RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 NGRNQ9NPE2 291 aaKnown RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 USP27XA6NNY8 438 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 F5H6K3 240 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 EIF3DO15371 548 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMTN-213ENST00000460658 ITIH2P19823 946 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 NCF2P19878 526 aaPredicted RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 KLRC3Q07444 240 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 TKFCQ3LXA3 575 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 ANKRD40Q6AI12 368 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 C3orf20Q8ND61 904 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 CATSPER1Q8NEC5 780 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 PPARGC1AQ9UBK2 798 aaKnown RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 GOLGA8MH3BSY2 632 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 KRT14P02533 472 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 ATP1A1P05023 1023 aaKnown RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 GNA15P30679 374 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 TRIM60Q495X7 471 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 EAPPQ56P03 285 aaPredicted RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 THEM5Q8N1Q8 247 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 NSUN4Q96CB9 384 aaKnown RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 ZNF302Q9NR11 478 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 NYAP2Q9P242 653 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 SRP68Q9UHB9 627 aaKnown RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 FRMPD1Q5SYB0 1578 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 BIRC2Q13490 618 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 TMEM270Q6UE05 265 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 RCOR2Q8IZ40 523 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 RIBC1Q8N443 379 aaPredicted RBP14.91□□□□□ -0.02
SMTN-213ENST00000460658 PIP4K2CQ8TBX8 421 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 ZWILCHQ9H900 591 aa14.91□□□□□ -0.02
SMTN-213ENST00000460658 SPAG6O75602 509 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 ARFIP2P53365 341 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 COPS2P61201 443 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 AP2B1P63010 937 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 CCDC92Q53HC0 331 aaPredicted RBP14.9□□□□□ -0.02
SMTN-213ENST00000460658 MMGT1Q8N4V1 131 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 DAGLBQ8NCG7 672 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 N4BP2L2Q92802 583 aaPredicted RBP14.9□□□□□ -0.02
SMTN-213ENST00000460658 SGSM3Q96HU1 749 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 BEGAINQ9BUH8 593 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 KDM6AO15550 1401 aaPredicted RBP14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L15C9J2P7 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L13C9JLJ4 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L11C9JVI0 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L18D6R9N7 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L22D6RA61 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L17D6RBQ6 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L19D6RCP7 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L20D6RJB6 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L24Q0WX57 530 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 NBPF20Q3BBV1 942 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 BEND6Q5SZJ8 279 aaPredicted RBP14.9□□□□□ -0.02
SMTN-213ENST00000460658 USP17L6PQ6QN14 398 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 TRIM67Q6ZTA4 783 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 SRBD1Q8N5C6 995 aaKnown RBP14.9□□□□□ -0.02
SMTN-213ENST00000460658 RNPC3Q96LT9 517 aaKnown RBP14.9□□□□□ -0.02
SMTN-213ENST00000460658 LXNQ9BS40 222 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 TRPV6Q9H1D0 765 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 EPN3Q9H201 632 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 CFAP69A5D8W1 941 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 CATSPER4Q7RTX7 472 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 MCUQ8NE86 351 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 OLFM3Q96PB7 478 aa14.9□□□□□ -0.02
SMTN-213ENST00000460658 DDX47Q9H0S4 455 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 251.7 ms