RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 RPS6KA5O75582 802 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 SMC2O95347 1197 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 MYL1P05976 194 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 IDEP14735 1019 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 GAP43P17677 238 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 LIG1P18858 919 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 POU3F3P20264 500 aaPredicted RBP10.13□□□□□ -0.79
RFX3-207ENST00000449190 MCM4P33991 863 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 PHKA2P46019 1235 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 GPC3P51654 580 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 ERVK-21P61565 698 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 ASIC1P78348 528 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 NFX1Q12986 1120 aaKnown RBP10.13□□□□□ -0.79
RFX3-207ENST00000449190 PAK2Q13177 524 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 DMP1Q13316 513 aaPredicted RBP10.13□□□□□ -0.79
RFX3-207ENST00000449190 GIT2Q14161 759 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 KIZQ2M2Z5 673 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 ZBTB8OSQ8IWT0 167 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 STAMQ92783 540 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 PAGE5Q96GU1 130 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 TGS1Q96RS0 853 aaKnown RBP10.13□□□□□ -0.79
RFX3-207ENST00000449190 PPP1R16BQ96T49 567 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 C7orf25Q9BPX7 421 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 PARVGQ9HBI0 331 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 ERVK-5Q9HDB9 667 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 GPRC5CQ9NQ84 441 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 KMT5AQ9NQR1 393 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 XPNPEP1Q9NQW7 623 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 LMBRD1Q9NUN5 540 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 PANK4Q9NVE7 773 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 ST3GAL5Q9UNP4 418 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
RFX3-207ENST00000449190 PHLPP2Q6ZVD8 1323 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 A0A087WZ62 844 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 LCHNA4D1U4 455 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 LINC01553A4QN01 128 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 LRRIQ4A6NIV6 560 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 SFI1A8K8P3 1242 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 GTPBP6O43824 516 aaPredicted RBP10.12□□□□□ -0.79
RFX3-207ENST00000449190 NR1I2O75469 434 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 ARHGEF15O94989 841 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 UPP2O95045 317 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 MBD3O95983 291 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 STAG3L1P0CL83 205 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 PLS3P13797 630 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 SCP2P22307 547 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 GLRA2P23416 452 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 EIF4BP23588 611 aaKnown RBP10.12□□□□□ -0.79
RFX3-207ENST00000449190 ABCD1P33897 745 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 NAMPTP43490 491 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 EFNA5P52803 228 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 PEX3P56589 373 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 DRP2Q13474 957 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 ADGRE1Q14246 886 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 HERC4Q5GLZ8 1057 aaPredicted RBP10.12□□□□□ -0.79
RFX3-207ENST00000449190 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
RFX3-207ENST00000449190 SRGAP1Q7Z6B7 1085 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 KSR1Q8IVT5 923 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 RNF149Q8NC42 400 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 SLC17A8Q8NDX2 589 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 ENGASEQ8NFI3 743 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 MAFAQ8NHW3 353 aaPredicted RBP10.12□□□□□ -0.79
RFX3-207ENST00000449190 ASAP3Q8TDY4 903 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 LRRC15Q8TF66 581 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 TMEM40Q8WWA1 233 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 SAMD11Q96NU1 681 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 YME1L1Q96TA2 773 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 REEP2Q9BRK0 252 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 FDXACB1Q9BRP7 624 aaPredicted RBP10.12□□□□□ -0.79
RFX3-207ENST00000449190 POLD4Q9HCU8 107 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 RGS18Q9NS28 235 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 C1orf112Q9NSG2 853 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 DACT1Q9NYF0 836 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 SEL1LQ9UBV2 794 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 TANC1Q9C0D5 1861 aa10.12□□□□□ -0.79
RFX3-207ENST00000449190 MYH15Q9Y2K3 1946 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 PVALEFA0A1B0GWK0 134 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 DARSP14868 501 aaKnown RBP10.11□□□□□ -0.79
RFX3-207ENST00000449190 IGFBP4P22692 258 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 SFPQP23246 707 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■■■□□ 15.1
RFX3-207ENST00000449190 FAM189BP81408 668 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 SNW1Q13573 536 aaKnown RBP10.11□□□□□ -0.79
RFX3-207ENST00000449190 CAPSQ13938 189 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 CNNM4Q6P4Q7 775 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 STXBP4Q6ZWJ1 553 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 NPAS4Q8IUM7 802 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
RFX3-207ENST00000449190 CRIPAKQ8N1N5 446 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 SPIRE2Q8WWL2 714 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 ARNTL2Q8WYA1 636 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 ZNF689Q96CS4 500 aaPredicted RBP10.11□□□□□ -0.79
RFX3-207ENST00000449190 DNAJC19Q96DA6 116 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 ZNF668Q96K58 619 aaPredicted RBP10.11□□□□□ -0.79
RFX3-207ENST00000449190 OSMRQ99650 979 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 TRIM9Q9C026 710 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 BLZF1Q9H2G9 400 aa10.11□□□□□ -0.79
RFX3-207ENST00000449190 TMX1Q9H3N1 280 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms