RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PTGISQ16647 500 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 SRGAP1Q7Z6B7 1085 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 FILIP1Q7Z7B0 1213 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 SLC9A9Q8IVB4 645 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 BICD1Q96G01 975 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 SCLT1Q96NL6 688 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 PPP1R16BQ96T49 567 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 ADAMTS10Q9H324 1103 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 FZD8Q9H461 694 aa25.21■■□□□ 1.63
CPSF4-204ENST00000436336 MAGEC2Q9UBF1 373 aaPredicted RBP25.21■■□□□ 1.63
CPSF4-204ENST00000436336 KCNJ18B7U540 433 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 INO80B-WBP1J3KQ70 363 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 HNRNPDLO14979 420 aaKnown RBP25.2■■□□□ 1.63
CPSF4-204ENST00000436336 GPR32O75388 356 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 PRKCBP05771 671 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 EEF1GP26641 437 aaKnown RBP25.2■■□□□ 1.63
CPSF4-204ENST00000436336 KCNJ12Q14500 433 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 TCP11X2Q5H9J9 407 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 RSPH3Q86UC2 560 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 EEF2KMTQ96G04 330 aa25.2■■□□□ 1.63
CPSF4-204ENST00000436336 INO80BQ9C086 356 aaPredicted RBP25.2■■□□□ 1.63
CPSF4-204ENST00000436336 PRMT7Q9NVM4 692 aaPredicted RBP25.2■■□□□ 1.63
CPSF4-204ENST00000436336 AP5Z1O43299 807 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 GNA14O95837 355 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 LIG4P49917 911 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 FANCCQ00597 558 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 TMEM62Q0P6H9 643 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 KIZQ2M2Z5 673 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 ZPBP2Q6X784 338 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 RPAINQ86UA6 219 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 ANKRD20A12PQ8NF67 263 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 CNOT6LQ96LI5 555 aaKnown RBP25.2■■□□□ 1.62
CPSF4-204ENST00000436336 CTAGE1Q96RT6 745 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 MRPL4Q9BYD3 311 aaKnown RBP25.2■■□□□ 1.62
CPSF4-204ENST00000436336 DMAC2Q9NW81 257 aa25.2■■□□□ 1.62
CPSF4-204ENST00000436336 ANKRD63C9JTQ0 380 aa25.19■■□□□ 1.62
CPSF4-204ENST00000436336 ARVCFO00192 962 aa25.19■■□□□ 1.62
CPSF4-204ENST00000436336 ACKR2O00590 384 aa25.19■■□□□ 1.62
CPSF4-204ENST00000436336 TFRCP02786 760 aaKnown RBP25.19■■□□□ 1.62
CPSF4-204ENST00000436336 FAM187BQ17R55 369 aa25.19■■□□□ 1.62
CPSF4-204ENST00000436336 ARMCX5Q6P1M9 558 aa25.19■■□□□ 1.62
CPSF4-204ENST00000436336 SLC39A4Q6P5W5 647 aa25.19■■□□□ 1.62
CPSF4-204ENST00000436336 GCOM2Q9BZD3 368 aaPredicted RBP25.19■■□□□ 1.62
CPSF4-204ENST00000436336 MINDY3Q9H8M7 445 aa25.19■■□□□ 1.62
CPSF4-204ENST00000436336 LIMA1Q9UHB6 759 aaKnown RBP25.19■■□□□ 1.62
CPSF4-204ENST00000436336 TISP43B9A030 160 aa25.18■■□□□ 1.62
CPSF4-204ENST00000436336 SERPINC1P01008 464 aa25.18■■□□□ 1.62
CPSF4-204ENST00000436336 EDN1P05305 212 aa25.18■■□□□ 1.62
CPSF4-204ENST00000436336 PTK7Q13308 1070 aa25.18■■□□□ 1.62
CPSF4-204ENST00000436336 ANP32BQ92688 251 aaKnown RBP25.18■■□□□ 1.62
CPSF4-204ENST00000436336 PRIMPOLQ96LW4 560 aa25.18■■□□□ 1.62
CPSF4-204ENST00000436336 NOD1Q9Y239 953 aa25.18■■□□□ 1.62
CPSF4-204ENST00000436336 GARTP22102 1010 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 GJA8P48165 433 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 CBWD1Q9BRT8 395 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 TARS2Q9BW92 718 aaKnown RBP25.17■■□□□ 1.62
CPSF4-204ENST00000436336 TRIM5Q9C035 493 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 TRMT13Q9NUP7 481 aaKnown RBP25.17■■□□□ 1.62
CPSF4-204ENST00000436336 STYXL1Q9Y6J8 313 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 SLC16A3O15427 465 aaKnown RBP25.17■■□□□ 1.62
CPSF4-204ENST00000436336 ADSSP30520 456 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 MARSP56192 900 aaKnown RBP25.17■■□□□ 1.62
CPSF4-204ENST00000436336 MRPS6P82932 125 aaKnown RBP25.17■■□□□ 1.62
CPSF4-204ENST00000436336 SLFN12LQ6IEE8 588 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 CREBRFQ8IUR6 639 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 OSMRQ99650 979 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 MKNK1Q9BUB5 465 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 GINS2Q9Y248 185 aa25.17■■□□□ 1.62
CPSF4-204ENST00000436336 BRCA2P51587 3418 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 LRRC10BA6NIK2 292 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 M0QZ92 97 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 IQCF3P0C7M6 154 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 CDK7P50613 346 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 CYP2J2P51589 502 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 CRYBB1P53674 252 aaPredicted RBP25.16■■□□□ 1.62
CPSF4-204ENST00000436336 PRPF4BQ13523 1007 aaKnown RBP25.16■■□□□ 1.62
CPSF4-204ENST00000436336 KRT31Q15323 416 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 PCBP1Q15365 356 aaKnown RBP eCLIP25.16■■□□□ 1.62
CPSF4-204ENST00000436336 CEP135Q66GS9 1140 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 ANKLE1Q8NAG6 615 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 POMGNT1Q8WZA1 660 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 ACO2Q99798 780 aaKnown RBP25.16■■□□□ 1.62
CPSF4-204ENST00000436336 CELF4Q9BZC1 486 aaKnown RBP25.16■■□□□ 1.62
CPSF4-204ENST00000436336 HSPBP1Q9NZL4 362 aa25.16■■□□□ 1.62
CPSF4-204ENST00000436336 DARSP14868 501 aaKnown RBP25.15■■□□□ 1.62
CPSF4-204ENST00000436336 CAPN2P17655 700 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 MNX1P50219 401 aaPredicted RBP25.15■■□□□ 1.62
CPSF4-204ENST00000436336 AMHR2Q16671 573 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 CCDC40Q4G0X9 1142 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 APTXQ7Z2E3 356 aaKnown RBP25.15■■□□□ 1.62
CPSF4-204ENST00000436336 XXYLT1Q8NBI6 393 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 WNT8BQ93098 351 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 PCIF1Q9H4Z3 704 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 CDHR5Q9HBB8 845 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 IFNKQ9P0W0 207 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 USP20Q9Y2K6 914 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 FRMD4BQ9Y2L6 1034 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 TRPV2Q9Y5S1 764 aa25.15■■□□□ 1.62
CPSF4-204ENST00000436336 KIAA0391O15091 583 aaKnown RBP25.15■■□□□ 1.62
CPSF4-204ENST00000436336 EXOC3O60645 756 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms