RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 BAP1Q92560 729 aa24.1■■□□□ 1.45
VSX1-205ENST00000429762 ZBTB45Q96K62 511 aaPredicted RBP24.1■■□□□ 1.45
VSX1-205ENST00000429762 NLRP4Q96MN2 994 aa24.1■■□□□ 1.45
VSX1-205ENST00000429762 TARS2Q9BW92 718 aaKnown RBP24.1■■□□□ 1.45
VSX1-205ENST00000429762 NAA15Q9BXJ9 866 aaKnown RBP24.1■■□□□ 1.45
VSX1-205ENST00000429762 ZNF215Q9UL58 517 aaPredicted RBP24.1■■□□□ 1.45
VSX1-205ENST00000429762 LRRC53A6NM62 1247 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 ALDH1A1P00352 501 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 KRT13P13646 458 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 KCNJ6P48051 423 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 POLR2FP61218 127 aaKnown RBP24.09■■□□□ 1.45
VSX1-205ENST00000429762 SNRPFP62306 86 aaKnown RBP24.09■■□□□ 1.45
VSX1-205ENST00000429762 TRPV1Q8NER1 839 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 GANQ9H2C0 597 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 HOXD8P13378 290 aaPredicted RBP24.09■■□□□ 1.45
VSX1-205ENST00000429762 PON1P27169 355 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 FMO5P49326 533 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 VAMP7P51809 220 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 BEX3Q00994 111 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 SNRNP35Q16560 246 aaKnown RBP24.09■■□□□ 1.45
VSX1-205ENST00000429762 EXOC3L4Q17RC7 722 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 DPY19L2P1Q6NXN4 242 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 CYP26C1Q6V0L0 522 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 CACNA2D4Q7Z3S7 1137 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 HAPLN2Q9GZV7 340 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 GCNT4Q9P109 453 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 PPP2R2CQ9Y2T4 447 aa24.09■■□□□ 1.45
VSX1-205ENST00000429762 IGHA2P01877 340 aa24.08■■□□□ 1.45
VSX1-205ENST00000429762 HTRA3P83110 453 aa24.08■■□□□ 1.45
VSX1-205ENST00000429762 PRKCZQ05513 592 aa24.08■■□□□ 1.45
VSX1-205ENST00000429762 BRDTQ58F21 947 aaPredicted RBP24.08■■□□□ 1.45
VSX1-205ENST00000429762 C1orf220Q5T0J3 134 aa24.08■■□□□ 1.45
VSX1-205ENST00000429762 ZNF397Q8NF99 534 aaPredicted RBP24.08■■□□□ 1.45
VSX1-205ENST00000429762 TRIB2Q92519 343 aa24.08■■□□□ 1.45
VSX1-205ENST00000429762 CREBZFQ9NS37 354 aa24.08■■□□□ 1.45
VSX1-205ENST00000429762 A0A0U1RQJ8 604 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 GAS2O43903 313 aaKnown RBP24.07■■□□□ 1.44
VSX1-205ENST00000429762 FLT3LGP49771 235 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 TRIM32Q13049 653 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 PPFIA1Q13136 1202 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 TSR1Q2NL82 804 aaKnown RBP24.07■■□□□ 1.44
VSX1-205ENST00000429762 PDXDC1Q6P996 788 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 GJB7Q6PEY0 223 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 GBP6Q6ZN66 633 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 INTS8Q75QN2 995 aaKnown RBP24.07■■□□□ 1.44
VSX1-205ENST00000429762 TMTC1Q8IUR5 882 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 ACRBPQ8NEB7 543 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 TMEM174Q8WUU8 243 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 ATRIPQ8WXE1 791 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 FAM213AQ9BRX8 229 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 ANKFY1Q9P2R3 1169 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 KCNG1Q9UIX4 513 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 AJAP1Q9UKB5 411 aaPredicted RBP24.07■■□□□ 1.44
VSX1-205ENST00000429762 PHLPP2Q6ZVD8 1323 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 PPP3CAQ08209 521 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 GRIK4Q16099 956 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 CCDC127Q96BQ5 260 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 FAM84AQ96KN4 292 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 JPH2Q9BR39 696 aaPredicted RBP24.07■■□□□ 1.44
VSX1-205ENST00000429762 SIX2Q9NPC8 291 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 KCND1Q9NSA2 647 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 CEP72Q9P209 647 aa24.07■■□□□ 1.44
VSX1-205ENST00000429762 A6NJR5 290 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 PLEKP08567 350 aaPredicted RBP24.06■■□□□ 1.44
VSX1-205ENST00000429762 HARSP12081 509 aaKnown RBP24.06■■□□□ 1.44
VSX1-205ENST00000429762 MATR3P43243 847 aaKnown RBP eCLIP24.06■■□□□ 1.44
VSX1-205ENST00000429762 GCLMP48507 274 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 APLP1P51693 650 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 MYL7Q01449 175 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 MXD4Q14582 209 aaPredicted RBP24.06■■□□□ 1.44
VSX1-205ENST00000429762 REXO1L1PQ8IX06 675 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 EXOC8Q8IYI6 725 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 ZNF784Q8NCA9 323 aaPredicted RBP24.06■■□□□ 1.44
VSX1-205ENST00000429762 POP1Q99575 1024 aaKnown RBP24.06■■□□□ 1.44
VSX1-205ENST00000429762 CCDC113Q9H0I3 377 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 TMEM134Q9H6X4 195 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 FHOD1Q9Y613 1164 aa24.06■■□□□ 1.44
VSX1-205ENST00000429762 RBAK-RBAKDNI3L0D1 243 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 OFD1O75665 1012 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 MEA1Q16626 185 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 CDCA2Q69YH5 1023 aaPredicted RBP24.05■■□□□ 1.44
VSX1-205ENST00000429762 MTHFD1LQ6UB35 978 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 TOPORSQ9NS56 1045 aaPredicted RBP24.05■■□□□ 1.44
VSX1-205ENST00000429762 SETD4Q9NVD3 440 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 VTNP04004 478 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 MYL3P08590 195 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 GARTP22102 1010 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 ZBTB41Q5SVQ8 909 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 MARCH8Q5T0T0 291 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 GPD1LQ8N335 351 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 KAT2BQ92831 832 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 IQCDQ96DY2 449 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 ZNHIT6Q9NWK9 470 aaKnown RBP24.05■■□□□ 1.44
VSX1-205ENST00000429762 AKT3Q9Y243 479 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 ADGRG1Q9Y653 693 aa24.05■■□□□ 1.44
VSX1-205ENST00000429762 LRRN2O75325 713 aa24.04■■□□□ 1.44
VSX1-205ENST00000429762 CSDE1O75534 798 aaKnown RBP24.04■■□□□ 1.44
VSX1-205ENST00000429762 TRPA1O75762 1119 aa24.04■■□□□ 1.44
VSX1-205ENST00000429762 PRKCBP05771 671 aa24.04■■□□□ 1.44
VSX1-205ENST00000429762 NLRP11P59045 1033 aaKnown RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms