RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 BIRC3Q13489 604 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 TUBB8Q3ZCM7 444 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 LLGL2Q6P1M3 1020 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 SLC47A2Q86VL8 602 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 VCPKMTQ9H867 229 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 SUGT1Q9Y2Z0 365 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 GREB1LQ9C091 1923 aaPredicted RBP15.51■□□□□ 0.07
ERCC3-202ENST00000426778 KIAA0391O15091 583 aaKnown RBP15.51■□□□□ 0.07
ERCC3-202ENST00000426778 SSTR3P32745 418 aaPredicted RBP15.51■□□□□ 0.07
ERCC3-202ENST00000426778 SAAL1Q96ER3 474 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 NCANO14594 1321 aa15.51■□□□□ 0.07
ERCC3-202ENST00000426778 GOLGA6L10A0A0M3HER8 536 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 GTPBP10A4D1E9 387 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 ANKRD62A6NC57 917 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 MMEP08473 750 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 VPS41P49754 854 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 SOX10P56693 466 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 MAPK7Q13164 816 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CEP55Q53EZ4 464 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 DACT2Q5SW24 774 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 DENND2CQ68D51 928 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CCDC137Q6PK04 289 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CACNA2D3Q8IZS8 1091 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 IL31RAQ8NI17 732 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 LMO3Q8TAP4 145 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 DHX38Q92620 1227 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 PWWP2AQ96N64 755 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 RAB17Q9H0T7 212 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 TMX4Q9H1E5 349 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 TOPORSQ9NS56 1045 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 RPTORQ8N122 1335 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 KIF13BQ9NQT8 1826 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 IPO5O00410 1097 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 MMP10P09238 476 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 POLR2MP0CAP2 368 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CREB1P16220 341 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 PADI6Q6TGC4 694 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 SUGP1Q8IWZ8 645 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CCDC105Q8IYK2 499 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 C1orf54Q8WWF1 131 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 GMCL1Q96IK5 515 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 PRMT1Q99873 361 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 WDR11Q9BZH6 1224 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CARD9Q9H257 536 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 GRHL1Q9NZI5 618 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 FRMPD4Q14CM0 1322 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 UBR3Q6ZT12 1888 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 EIF3DO15371 548 aaKnown RBP eCLIP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 TOM1O60784 492 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 PPFIA2O75334 1257 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 DLATP10515 647 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 NOP9Q86U38 636 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 NEK9Q8TD19 979 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 AGBL1Q96MI9 1066 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 SCLT1Q96NL6 688 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 DDX23Q9BUQ8 820 aaKnown RBP15.5■□□□□ 0.07
ERCC3-202ENST00000426778 TRIM7Q9C029 511 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 KLC4Q9NSK0 619 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 USP20Q9Y2K6 914 aa15.5■□□□□ 0.07
ERCC3-202ENST00000426778 SPOPO43791 374 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 SORBS3O60504 671 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 ACSL3O95573 720 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 CHRNA5P30532 468 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 NPEPPSP55786 919 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 AGBL2Q5U5Z8 902 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 TAX1BP1Q86VP1 789 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 ATG4AQ8WYN0 398 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 SEC14L1Q92503 715 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 XPO6Q96QU8 1125 aaKnown RBP15.49■□□□□ 0.07
ERCC3-202ENST00000426778 NACC1Q96RE7 527 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 INTUQ9ULD6 942 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 LY75O60449 1722 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 SLC16A4O15374 487 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 DRD4P21917 467 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 E2F5Q15329 346 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 LONRF1Q17RB8 773 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 ANKRD20A8PQ5CZ79 823 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 CPXCR1Q8N123 301 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 GMCL1P1Q8NEA9 526 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 TATDN2Q93075 761 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 DMAC2Q9NW81 257 aa15.49■□□□□ 0.07
ERCC3-202ENST00000426778 LTBP1Q14766 1721 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 KLRG2A4D1S0 409 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-202ENST00000426778 RGS16O15492 202 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-202ENST00000426778 NPR1P16066 1061 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 VAMP7P51809 220 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 GKAP1Q5VSY0 366 aaPredicted RBP15.48■□□□□ 0.07
ERCC3-202ENST00000426778 LRRC34Q8IZ02 419 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 SLC5A5Q92911 643 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 ELAC2Q9BQ52 826 aaKnown RBP15.48■□□□□ 0.07
ERCC3-202ENST00000426778 TXLNGYQ9BZA5 131 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 ADAM7Q9H2U9 754 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 PABPC3Q9H361 631 aaKnown RBP15.48■□□□□ 0.07
ERCC3-202ENST00000426778 DNAJC5Q9H3Z4 198 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 TUFT1Q9NNX1 390 aa15.48■□□□□ 0.07
ERCC3-202ENST00000426778 CTNNAL1Q9UBT7 734 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms