RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 AMHR2Q16671 573 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 TMC7Q7Z402 723 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 ZNF280BQ86YH2 543 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 SMRP1Q8NCR6 262 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 SMG8Q8ND04 991 aaKnown RBP20.53■□□□□ 0.88
NUP50-207ENST00000424634 PGBD4Q96DM1 585 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 CPB2Q96IY4 423 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 NGRNQ9NPE2 291 aaKnown RBP20.53■□□□□ 0.88
NUP50-207ENST00000424634 C11orf16Q9NQ32 467 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 GPRC5CQ9NQ84 441 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 ENTPD7Q9NQZ7 604 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 DNAJB4Q9UDY4 337 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 USO1O60763 962 aaKnown RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 ZC3H11AO75152 810 aaKnown RBP eCLIP20.52■□□□□ 0.88
NUP50-207ENST00000424634 CD2BP2O95400 341 aaKnown RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 GALTP07902 379 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 RPA1P27694 616 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 TRAPPC10P48553 1259 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 TFDP1Q14186 410 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 POTEGQ6S5H5 508 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 MAEAQ7L5Y9 396 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 MRPL43Q8N983 215 aaKnown RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 BCL7CQ8WUZ0 217 aaPredicted RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 RSPH1Q8WYR4 309 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 NACC1Q96RE7 527 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 CDCA3Q99618 268 aaPredicted RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 EIF2AQ9BY44 585 aaKnown RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 POLR3FQ9H1D9 316 aaPredicted RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 RNF39Q9H2S5 420 aa20.52■□□□□ 0.88
NUP50-207ENST00000424634 DBR1Q9UK59 544 aaKnown RBP20.52■□□□□ 0.88
NUP50-207ENST00000424634 INO80B-WBP1J3KQ70 363 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 DDHD2O94830 711 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 ERLIN2O94905 339 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
NUP50-207ENST00000424634 GNL2Q13823 731 aaKnown RBP20.51■□□□□ 0.87
NUP50-207ENST00000424634 ECM1Q16610 540 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 TMEM184AQ6ZMB5 413 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 CCDC43Q96MW1 224 aaKnown RBP20.51■□□□□ 0.87
NUP50-207ENST00000424634 LRFN3Q9BTN0 628 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 NFKBIZQ9BYH8 718 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 RSAD1Q9HA92 442 aa20.51■□□□□ 0.87
NUP50-207ENST00000424634 C2orf71A6NGG8 1288 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 ARF4P18085 180 aaPredicted RBP20.5■□□□□ 0.87
NUP50-207ENST00000424634 AXLP30530 894 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 SLC11A1P49279 550 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 RNASELQ05823 741 aaKnown RBP20.5■□□□□ 0.87
NUP50-207ENST00000424634 PCBP1Q15365 356 aaKnown RBP eCLIP20.5■□□□□ 0.87
NUP50-207ENST00000424634 TMEM169Q96HH4 297 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 IGSF21Q96ID5 467 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 TMX3Q96JJ7 454 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 VN1R3Q9BXE9 311 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 GBP3Q9H0R5 595 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 USP15Q9Y4E8 981 aaPredicted RBP20.5■□□□□ 0.87
NUP50-207ENST00000424634 HES2Q9Y543 173 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 IPPQ9Y573 584 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 PCDHB6Q9Y5E3 794 aa20.5■□□□□ 0.87
NUP50-207ENST00000424634 FAM86C2PA6NEL3 165 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 B4GALT5O43286 388 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 CXCL14O95715 111 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 FXR2P51116 673 aaKnown RBP eCLIP20.49■□□□□ 0.87
NUP50-207ENST00000424634 PTGDRQ13258 359 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 SMC1AQ14683 1233 aaKnown RBP20.49■□□□□ 0.87
NUP50-207ENST00000424634 LLGL2Q6P1M3 1020 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 NOTUMQ6P988 496 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 VPS52Q8N1B4 723 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 AUTS2Q8WXX7 1259 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 CSRNP2Q9H175 543 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 S1PR5Q9H228 398 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 NOL7Q9UMY1 257 aaKnown RBP20.49■□□□□ 0.87
NUP50-207ENST00000424634 CNTNAP2Q9UHC6 1331 aa20.49■□□□□ 0.87
NUP50-207ENST00000424634 ST18O60284 1047 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 GPR37L1O60883 481 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 POMCP01189 267 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 ITGA4P13612 1032 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 IL17AQ16552 155 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 ANKRD54Q6NXT1 300 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 SYCE2Q6PIF2 218 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 PADI6Q6TGC4 694 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 DDX53Q86TM3 631 aaKnown RBP20.48■□□□□ 0.87
NUP50-207ENST00000424634 CDR2LQ86X02 465 aaPredicted RBP20.48■□□□□ 0.87
NUP50-207ENST00000424634 CNNM3Q8NE01 707 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 ERMNQ8TAM6 284 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 URGCPQ8TCY9 931 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 BSNDQ8WZ55 320 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 CCDC51Q96ER9 411 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 ZBP1Q9H171 429 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 MIOSQ9NXC5 875 aa20.48■□□□□ 0.87
NUP50-207ENST00000424634 FSD2A1L4K1 749 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 CLASP2O75122 1294 aaKnown RBP20.47■□□□□ 0.87
NUP50-207ENST00000424634 CYP11B2P19099 503 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 NCBP1Q09161 790 aaKnown RBP20.47■□□□□ 0.87
NUP50-207ENST00000424634 TMEM31Q5JXX7 168 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 MCPH1Q8NEM0 835 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 SUSD6Q92537 303 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 GAD1Q99259 594 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 POLD4Q9HCU8 107 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 KANSL3Q9P2N6 904 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 LRWD1Q9UFC0 647 aa20.47■□□□□ 0.87
NUP50-207ENST00000424634 A0A1B0GUA9 196 aa20.46■□□□□ 0.87
NUP50-207ENST00000424634 ARL5CA6NH57 179 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms