RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 DDX46Q7L014 1031 aaKnown RBP6.03□□□□□ -1.44
CLK1-203ENST00000409769 BCL6BQ8N143 479 aaPredicted RBP6.03□□□□□ -1.44
CLK1-203ENST00000409769 NXPE1Q8N323 547 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 CHAC2Q8WUX2 184 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 CHTF18Q8WVB6 975 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 MIEF2Q96C03 454 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 TMEM176AQ96HP8 235 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 MMRN2Q9H8L6 949 aa6.03□□□□□ -1.44
CLK1-203ENST00000409769 AGO3Q9H9G7 860 aaKnown RBP6.03□□□□□ -1.44
CLK1-203ENST00000409769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.03□□□□□ -1.44
CLK1-203ENST00000409769 TROQ12816 1431 aaPredicted RBP6.02□□□□□ -1.45
CLK1-203ENST00000409769 ZEB2O60315 1214 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 SMAD3P84022 425 aaKnown RBP6.02□□□□□ -1.45
CLK1-203ENST00000409769 ADAM15Q13444 863 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 RRP1BQ14684 758 aaKnown RBP6.02□□□□□ -1.45
CLK1-203ENST00000409769 DGKDQ16760 1214 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 GAGE13Q4V321 117 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 MRGPRGQ86SM5 289 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 PASD1Q8IV76 773 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 LEO1Q8WVC0 666 aaPredicted RBP6.02□□□□□ -1.45
CLK1-203ENST00000409769 GCDHQ92947 438 aaPredicted RBP6.02□□□□□ -1.45
CLK1-203ENST00000409769 MAML3Q96JK9 1138 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 DENND2AQ9ULE3 1009 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 KIF14Q15058 1648 aa6.02□□□□□ -1.45
CLK1-203ENST00000409769 TGM5O43548 720 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 PRLP01236 227 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 SLC9A1P19634 815 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 KPNA1P52294 538 aaPredicted RBP6.01□□□□□ -1.45
CLK1-203ENST00000409769 SART3Q15020 963 aaKnown RBP6.01□□□□□ -1.45
CLK1-203ENST00000409769 TTC38Q5R3I4 469 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 SPTY2D1Q68D10 685 aaPredicted RBP6.01□□□□□ -1.45
CLK1-203ENST00000409769 ESRP1Q6NXG1 681 aaKnown RBP6.01□□□□□ -1.45
CLK1-203ENST00000409769 LDLRAD3Q86YD5 345 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 ULK2Q8IYT8 1036 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 AFAP1L2Q8N4X5 818 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 ZMAT4Q9H898 229 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 THG1LQ9NWX6 298 aaKnown RBP6.01□□□□□ -1.45
CLK1-203ENST00000409769 USP36Q9P275 1121 aaKnown RBP6.01□□□□□ -1.45
CLK1-203ENST00000409769 SH3BP1Q9Y3L3 701 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 NCOA2Q15596 1464 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 ABCC10Q5T3U5 1492 aa6.01□□□□□ -1.45
CLK1-203ENST00000409769 MAPKBP1O60336 1514 aa6□□□□□ -1.45
CLK1-203ENST00000409769 TMEM191CA6NGB0 347 aa6□□□□□ -1.45
CLK1-203ENST00000409769 MAFGO15525 162 aa6□□□□□ -1.45
CLK1-203ENST00000409769 FKBP9O95302 570 aa6□□□□□ -1.45
CLK1-203ENST00000409769 CD40P25942 277 aa6□□□□□ -1.45
CLK1-203ENST00000409769 PTX3P26022 381 aaPredicted RBP6□□□□□ -1.45
CLK1-203ENST00000409769 CANXP27824 592 aaKnown RBP6□□□□□ -1.45
CLK1-203ENST00000409769 ADCYAP1R1P41586 468 aa6□□□□□ -1.45
CLK1-203ENST00000409769 ATP2C1P98194 919 aaPredicted RBP6□□□□□ -1.45
CLK1-203ENST00000409769 CNGB1Q14028 1251 aaPredicted RBP6□□□□□ -1.45
CLK1-203ENST00000409769 MFSD5Q6N075 450 aa6□□□□□ -1.45
CLK1-203ENST00000409769 FKBP9P1Q75LS8 142 aa6□□□□□ -1.45
CLK1-203ENST00000409769 KANSL1Q7Z3B3 1105 aa6□□□□□ -1.45
CLK1-203ENST00000409769 GSPT2Q8IYD1 628 aaKnown RBP6□□□□□ -1.45
CLK1-203ENST00000409769 LARP4BQ92615 738 aaKnown RBP6□□□□□ -1.45
CLK1-203ENST00000409769 ERCC4Q92889 916 aaPredicted RBP6□□□□□ -1.45
CLK1-203ENST00000409769 KCMF1Q9P0J7 381 aa6□□□□□ -1.45
CLK1-203ENST00000409769 H2AFY2Q9P0M6 372 aaPredicted RBP6□□□□□ -1.45
CLK1-203ENST00000409769 REXO2Q9Y3B8 237 aaKnown RBP6□□□□□ -1.45
CLK1-203ENST00000409769 MTUS2Q5JR59 1369 aa6□□□□□ -1.45
CLK1-203ENST00000409769 SBNO2Q9Y2G9 1366 aa6□□□□□ -1.45
CLK1-203ENST00000409769 RRBP1Q9P2E9 1410 aaKnown RBP5.99□□□□□ -1.45
CLK1-203ENST00000409769 CDC42BPAQ5VT25 1732 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 WDR7Q9Y4E6 1490 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 PHLDB1Q86UU1 1377 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 UBA6A0AVT1 1052 aaPredicted RBP5.99□□□□□ -1.45
CLK1-203ENST00000409769 PPFIA2O75334 1257 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 PTGS2P35354 604 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 MAN2A2P49641 1150 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 CYB5RLQ6IPT4 315 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 C11orf74Q86VG3 221 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 PHYKPLQ8IUZ5 450 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 ZNF610Q8N9Z0 462 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 OR5AN1Q8NGI8 311 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 CLIP3Q96DZ5 547 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 IFT22Q9H7X7 185 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 EMC7Q9NPA0 242 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 TOMM22Q9NS69 142 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 SPTLC3Q9NUV7 552 aa5.99□□□□□ -1.45
CLK1-203ENST00000409769 ITSN2Q9NZM3 1697 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 TTC37Q6PGP7 1564 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 PLEKHD1A6NEE1 506 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 BRINP1O60477 761 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 RAMP2O60895 175 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 PPFIA4O75335 1185 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 EYA4O95677 639 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 LSP1P33241 339 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 BPIFB4P59827 614 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 IL2P60568 153 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 SAFB2Q14151 953 aaKnown RBP eCLIP5.98□□□□□ -1.45
CLK1-203ENST00000409769 TERF2Q15554 542 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 SLFN12LQ6IEE8 588 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 FAM111BQ6SJ93 734 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 BMP8AQ7Z5Y6 402 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 ZNF575Q86XF7 245 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 RPGRQ92834 1020 aaKnown RBP5.98□□□□□ -1.45
CLK1-203ENST00000409769 USP7Q93009 1102 aa5.98□□□□□ -1.45
CLK1-203ENST00000409769 NKD2Q969F2 451 aaPredicted RBP5.98□□□□□ -1.45
CLK1-203ENST00000409769 GPR101Q96P66 508 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms