RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ZNF667Q5HYK9 610 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 SIPA1L3O60292 1781 aaPredicted RBP15.1■□□□□ 0.01
SCAF4-202ENST00000399804 NFKBIEO00221 500 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 FGGP02679 453 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 SPATA31C1P0DKV0 1188 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
SCAF4-202ENST00000399804 MAP1SQ66K74 1059 aaPredicted RBP15.1■□□□□ 0.01
SCAF4-202ENST00000399804 CBWD2Q8IUF1 395 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 SMARCAD1Q9H4L7 1026 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 ADAM22Q9P0K1 906 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 RSPH14Q9UHP6 348 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 PTPN22Q9Y2R2 807 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 A0A087X0T9 212 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 FAM228BP0C875 321 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 RFX1P22670 979 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 KIF22Q14807 665 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 RNF187Q5TA31 235 aaPredicted RBP15.1■□□□□ 0.01
SCAF4-202ENST00000399804 C7orf31Q8N865 590 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 MRPL47Q9HD33 250 aaKnown RBP15.1■□□□□ 0.01
SCAF4-202ENST00000399804 PLCH1Q4KWH8 1693 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 IGSF9BQ9UPX0 1349 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 RNF8O76064 485 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 PRKCBP05771 671 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 GALCP54803 685 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 JAG1P78504 1218 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 APBA1Q02410 837 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 NFX1Q12986 1120 aaKnown RBP15.09■□□□□ 0.01
SCAF4-202ENST00000399804 KRT71Q3SY84 523 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 TRIM65Q6PJ69 517 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 C7orf43Q8WVR3 580 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 OPTNQ96CV9 577 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 AGPAT1Q99943 283 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 PAIP2Q9BPZ3 127 aaKnown RBP15.09■□□□□ 0.01
SCAF4-202ENST00000399804 ARHGAP20Q9P2F6 1191 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 TRAF3IP3Q9Y228 551 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 SUPT20HL2P0C7V6 817 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 HADHQ16836 314 aaKnown RBP15.09■□□□□ 0.01
SCAF4-202ENST00000399804 NIPA1Q7RTP0 329 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 VSIG10LQ86VR7 867 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 ZNF507Q8TCN5 953 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 HSD17B14Q9BPX1 270 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 CALCOCO1Q9P1Z2 691 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 ANAPC7Q9UJX3 599 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 SNX12Q9UMY4 172 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 M0R2N6 131 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 EGFRP00533 1210 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 KLRC1P26715 233 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 CTNNA1P35221 906 aaKnown RBP15.09■□□□□ 0.01
SCAF4-202ENST00000399804 PPFIA1Q13136 1202 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 DNAJC24Q6P3W2 148 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 C11orf70Q9BRQ4 267 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 RABEP2Q9H5N1 569 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 DAAM1Q9Y4D1 1078 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 DUOX1Q9NRD9 1551 aa15.09■□□□□ 0.01
SCAF4-202ENST00000399804 ZNF699Q32M78 642 aa15.08■□□□□ 0.01
SCAF4-202ENST00000399804 C1orf186Q6ZWK4 172 aa15.08■□□□□ 0.01
SCAF4-202ENST00000399804 MRRFQ96E11 262 aaKnown RBP15.08■□□□□ 0.01
SCAF4-202ENST00000399804 C17orf75Q9HAS0 396 aa15.08■□□□□ 0.01
SCAF4-202ENST00000399804 IRF6O14896 467 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 CELF2O95319 508 aaKnown RBP15.08■□□□□ 0
SCAF4-202ENST00000399804 CETPP11597 493 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 ADCY8P40145 1251 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 OAZ1P54368 228 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 DUOXA2Q1HG44 320 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 CEP85LQ5SZL2 805 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 RUFY4Q6ZNE9 571 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 MTMR14Q8NCE2 650 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 UHMK1Q8TAS1 419 aaKnown RBP15.08■□□□□ 0
SCAF4-202ENST00000399804 STMN4Q9H169 189 aaPredicted RBP15.08■□□□□ 0
SCAF4-202ENST00000399804 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0
SCAF4-202ENST00000399804 MYL3P08590 195 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 CLK2P49760 499 aaKnown RBP15.08■□□□□ 0
SCAF4-202ENST00000399804 HUNKP57058 714 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 SNX1Q13596 522 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 MXD4Q14582 209 aaPredicted RBP15.08■□□□□ 0
SCAF4-202ENST00000399804 TAF1CQ15572 869 aaPredicted RBP15.08■□□□□ 0
SCAF4-202ENST00000399804 CATSPERGQ6ZRH7 1159 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 IRF2BP1Q8IU81 584 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 RFFLQ8WZ73 363 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 KLRG1Q96E93 195 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
SCAF4-202ENST00000399804 ATP8B1O43520 1251 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 ATP9AO75110 1047 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 GPC3P51654 580 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 ZNF211Q13398 564 aaPredicted RBP15.07■□□□□ 0
SCAF4-202ENST00000399804 MOB2Q70IA6 237 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 CDR2LQ86X02 465 aaPredicted RBP15.07■□□□□ 0
SCAF4-202ENST00000399804 PI4K2AQ9BTU6 479 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 ASCC2Q9H1I8 757 aaPredicted RBP15.07■□□□□ 0
SCAF4-202ENST00000399804 L2HGDHQ9H9P8 463 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 KCNK9Q9NPC2 374 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 ZNF148Q9UQR1 794 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 ZNF541Q9H0D2 1346 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 CXCL11O14625 94 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 SSTR3P32745 418 aaPredicted RBP15.07■□□□□ 0
SCAF4-202ENST00000399804 GABPB1Q06547 395 aaPredicted RBP15.07■□□□□ 0
SCAF4-202ENST00000399804 CASP8Q14790 479 aa15.07■□□□□ 0
SCAF4-202ENST00000399804 CC2D1AQ6P1N0 951 aaPredicted RBP15.07■□□□□ 0
SCAF4-202ENST00000399804 SIAH1Q8IUQ4 282 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms