RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 FBXO25Q8TCJ0 367 aa12.71□□□□□ -0.37
ITSN1-211ENST00000399355 LRRN4Q8WUT4 740 aa12.71□□□□□ -0.37
ITSN1-211ENST00000399355 SLC5A5Q92911 643 aa12.71□□□□□ -0.37
ITSN1-211ENST00000399355 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.38
ITSN1-211ENST00000399355 IQCKQ8N0W5 287 aa12.71□□□□□ -0.38
ITSN1-211ENST00000399355 THOC1Q96FV9 657 aaKnown RBP12.71□□□□□ -0.38
ITSN1-211ENST00000399355 HSPBP1Q9NZL4 362 aa12.71□□□□□ -0.38
ITSN1-211ENST00000399355 NOVA2Q9UNW9 492 aaKnown RBP12.71□□□□□ -0.38
ITSN1-211ENST00000399355 PDE4DIPQ5VU43 2346 aa12.71□□□□□ -0.38
ITSN1-211ENST00000399355 PFASO15067 1338 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 PITPNM2Q9BZ72 1349 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 EDN1P05305 212 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 PYGMP11217 842 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 KRT5P13647 590 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 TNFAIP3P21580 790 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 IFNAR2P48551 515 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 TMEM117Q9H0C3 514 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 MED4Q9NPJ6 270 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 CTNNAL1Q9UBT7 734 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 ALG6Q9Y672 507 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 UMODL1Q5DID0 1318 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 MYO15AQ9UKN7 3530 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 MYO1FO00160 1098 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 CIITAP33076 1130 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 OSTNP61366 133 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 ATP13A4Q4VNC1 1196 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 ODF2Q5BJF6 829 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 MICALL1Q8N3F8 863 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 MGARPQ8TDB4 240 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-211ENST00000399355 FAM213AQ9BRX8 229 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 SUGT1Q9Y2Z0 365 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 NDUFAB1O14561 156 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 VCAM1P19320 739 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 MARK3P27448 753 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 CNTN2Q02246 1040 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 LRRC14Q15048 493 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 ANKS1BQ7Z6G8 1248 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 FAM212AQ96EL1 285 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 MXRA8Q9BRK3 442 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 RPAP3Q9H6T3 665 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-211ENST00000399355 GDF3Q9NR23 364 aa12.7□□□□□ -0.38
ITSN1-211ENST00000399355 PHF20L1A8MW92 1017 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 COMTP21964 271 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 GUCY2CP25092 1073 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 MARSP56192 900 aaKnown RBP12.69□□□□□ -0.38
ITSN1-211ENST00000399355 SWSAP1Q6NVH7 229 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 SLC39A4Q6P5W5 647 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 TRIM50Q86XT4 487 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 TEKT3Q9BXF9 490 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 DENND3A2RUS2 1198 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 NRLP54845 237 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 IFI35P80217 286 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-211ENST00000399355 SP2Q02086 613 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 TTLL6Q8N841 843 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 HAUS1Q96CS2 278 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 ANKFY1Q9P2R3 1169 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 GABBR1Q9UBS5 961 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 E7EVH7 732 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 RGL2O15211 777 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 VAMP7P51809 220 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 ZNF844Q08AG5 666 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 MTERF2Q49AM1 385 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 ZNF662Q6ZS27 426 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 CTNNBL1Q8WYA6 563 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-211ENST00000399355 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
ITSN1-211ENST00000399355 PNMA2Q9UL42 364 aa12.69□□□□□ -0.38
ITSN1-211ENST00000399355 ZNFX1Q9P2E3 1918 aaKnown RBP12.69□□□□□ -0.38
ITSN1-211ENST00000399355 PGRMC1O00264 195 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 TULP2O00295 520 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 PIK3R2O00459 728 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 CLDN3O15551 220 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 CAND2O75155 1236 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 RGS20O76081 388 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 CHRNB2P17787 502 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 MAGOHP61326 146 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 MAGOHBQ96A72 148 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 POLR3CQ9BUI4 534 aaPredicted RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 DDX23Q9BUQ8 820 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 SEMA4AQ9H3S1 761 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 DBR1Q9UK59 544 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 USTQ9Y2C2 406 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 SPEGQ15772 3267 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 SSR1P43307 286 aaKnown RBP12.68□□□□□ -0.38
ITSN1-211ENST00000399355 TUBB2AQ13885 445 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 FAM151AQ8WW52 585 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 GMLQ99445 158 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 TUBB2BQ9BVA1 445 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 TCEAL9Q9UHQ7 104 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 PI4K2BG5E9Z4 385 aa12.68□□□□□ -0.38
ITSN1-211ENST00000399355 DDX3YO15523 660 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms