RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 HAPLN2Q9GZV7 340 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 PEX5P50542 639 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 NAP1L1P55209 391 aaKnown RBP16.69■□□□□ 0.26
CPSF7-202ENST00000394888 SIX1Q15475 284 aaPredicted RBP16.69■□□□□ 0.26
CPSF7-202ENST00000394888 ALS2CLQ60I27 953 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 HAUS6Q7Z4H7 955 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 CBWD2Q8IUF1 395 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 XPNPEP1Q9NQW7 623 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 HOMER2Q9NSB8 354 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 SGPL1O95470 568 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 AGPAT1Q99943 283 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 NTPCRQ9BSD7 190 aaKnown RBP16.69■□□□□ 0.26
CPSF7-202ENST00000394888 CELF4Q9BZC1 486 aaKnown RBP16.69■□□□□ 0.26
CPSF7-202ENST00000394888 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
CPSF7-202ENST00000394888 ZSWIM8A7E2V4 1837 aa16.69■□□□□ 0.26
CPSF7-202ENST00000394888 SLC16A4O15374 487 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 EDN1P05305 212 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 ALAS1P13196 640 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 GCLMP48507 274 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 IRAK1P51617 712 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 NBPF12Q5TAG4 269 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 DEFB132Q7Z7B7 95 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 KLHL7Q8IXQ5 586 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 KRT35Q92764 455 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 POP1Q99575 1024 aaKnown RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 TAF1DQ9H5J8 278 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 ZDHHC18Q9NUE0 388 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 CHORDC1Q9UHD1 332 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 FSTL1Q12841 308 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 IFT20Q8IY31 132 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 CCDC43Q96MW1 224 aaKnown RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 TOPORSQ9NS56 1045 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 CCDC66A2RUB6 948 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 TMCO5BA8MYB1 307 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 CTNND1O60716 968 aaKnown RBP16.68■□□□□ 0.26
CPSF7-202ENST00000394888 MTA2O94776 668 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 COPB2P35606 906 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 FMO1Q01740 532 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 CPXCR1Q8N123 301 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 FRMD4BQ9Y2L6 1034 aa16.68■□□□□ 0.26
CPSF7-202ENST00000394888 ATP4AP20648 1035 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 LMNB1P20700 586 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 SP2Q02086 613 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 GPS2Q13227 327 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 SAMD7Q7Z3H4 446 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 VSIG10LQ86VR7 867 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 NIM1KQ8IY84 436 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 C1orf131Q8NDD1 294 aaKnown RBP16.67■□□□□ 0.26
CPSF7-202ENST00000394888 EHMT1Q9H9B1 1298 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 CALCOCO1Q9P1Z2 691 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 AMACRQ9UHK6 382 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 PGRMC1O00264 195 aaKnown RBP16.67■□□□□ 0.26
CPSF7-202ENST00000394888 EXOC3O60645 756 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 NPTX2P47972 431 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 GUCY2FP51841 1108 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 SLC47A2Q86VL8 602 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 SHC3Q92529 594 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 ZNF516Q92618 1163 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 DAAM1Q9Y4D1 1078 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 HSD17B3P37058 310 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 PTGIRP43119 386 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 ARHGAP44Q17R89 818 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 INTS8Q75QN2 995 aaKnown RBP16.67■□□□□ 0.26
CPSF7-202ENST00000394888 DAAM2Q86T65 1068 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 LUC7LQ9NQ29 371 aaKnown RBP16.67■□□□□ 0.26
CPSF7-202ENST00000394888 TBX20Q9UMR3 447 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 PTPRJQ12913 1337 aa16.67■□□□□ 0.26
CPSF7-202ENST00000394888 P4HA2O15460 535 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 TTI1O43156 1089 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 CEP104O60308 925 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 CALCAP01258 141 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 PRPF4BQ13523 1007 aaKnown RBP16.66■□□□□ 0.26
CPSF7-202ENST00000394888 HS2ST1Q7LGA3 356 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 MFSD14AQ96MC6 490 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 UBE2TQ9NPD8 197 aaPredicted RBP16.66■□□□□ 0.26
CPSF7-202ENST00000394888 RFX1P22670 979 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 PEX3P56589 373 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 TTC27Q6P3X3 843 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 ZDHHC24Q6UX98 284 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 PARD3BQ8TEW8 1205 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 ACCSQ96QU6 501 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 TBC1D22BQ9NU19 505 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 TCRBV7S2A1N4TA0A589 114 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 ANKRD62A6NC57 917 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 GOLGA8IPA6NC78 632 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 GOLGA8JA6NMD2 632 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 CLDN10P78369 228 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 IRX5P78411 483 aaPredicted RBP16.66■□□□□ 0.26
CPSF7-202ENST00000394888 CIAPIN1Q6FI81 312 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 PEX26Q7Z412 305 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 SRLQ86TD4 932 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 IFT81Q8WYA0 676 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 TMEM206Q9H813 350 aa16.66■□□□□ 0.26
CPSF7-202ENST00000394888 HACL1Q9UJ83 578 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms