RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 CCDC113Q9H0I3 377 aa22.06■■□□□ 1.12
RER1-204ENST00000378518 TMEM134Q9H6X4 195 aa22.06■■□□□ 1.12
RER1-204ENST00000378518 KBTBD4Q9NVX7 518 aa22.06■■□□□ 1.12
RER1-204ENST00000378518 TMEM161AQ9NX61 479 aa22.06■■□□□ 1.12
RER1-204ENST00000378518 ARHGAP28Q9P2N2 729 aa22.06■■□□□ 1.12
RER1-204ENST00000378518 HPSEQ9Y251 543 aa22.06■■□□□ 1.12
RER1-204ENST00000378518 CNTNAP2Q9UHC6 1331 aa22.06■■□□□ 1.12
RER1-204ENST00000378518 FNDC1Q4ZHG4 1894 aaPredicted RBP22.05■■□□□ 1.12
RER1-204ENST00000378518 A0A0U1RQF3 1178 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 FAM237AA0A1B0GTK4 181 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 SLC16A4O15374 487 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 TRAK2O60296 914 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 IDEP14735 1019 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 GAP43P17677 238 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 ARF4P18085 180 aaPredicted RBP22.05■■□□□ 1.12
RER1-204ENST00000378518 ABCD1P33897 745 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 PBX2P40425 430 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 STRN3Q13033 797 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 AMHR2Q16671 573 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 FAM178BQ8IXR5 827 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 STAMQ92783 540 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 TIFAQ96CG3 184 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 LRCH3Q96II8 777 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 CPB2Q96IY4 423 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 TRAIPQ9BWF2 469 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 FAM105AQ9NUU6 356 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 SEL1LQ9UBV2 794 aa22.05■■□□□ 1.12
RER1-204ENST00000378518 K7ENM7 598 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 ACKR2O00590 384 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 N4BP3O15049 544 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 HOXA2O43364 376 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 SLFN14P0C7P3 912 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 HOXA11P31270 313 aaPredicted RBP22.04■■□□□ 1.12
RER1-204ENST00000378518 FXR1P51114 621 aaKnown RBP eCLIP22.04■■□□□ 1.12
RER1-204ENST00000378518 NDUFA8P51970 172 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 NCKAP1LP55160 1127 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 FAM189BP81408 668 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 HTRA4P83105 476 aaPredicted RBP22.04■■□□□ 1.12
RER1-204ENST00000378518 GPR153Q6NV75 609 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 ECHDC2Q86YB7 292 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 CCDC65Q8IXS2 484 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 DNAJC19Q96DA6 116 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 CCDC34Q96HJ3 373 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 TRIM6Q9C030 488 aaPredicted RBP22.04■■□□□ 1.12
RER1-204ENST00000378518 SLC28A3Q9HAS3 691 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 SERTAD1Q9UHV2 236 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 COL4A6Q14031 1691 aa22.04■■□□□ 1.12
RER1-204ENST00000378518 NLRC5Q86WI3 1866 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 TMEM265A0A087WTH1 108 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 B4GALT5O43286 388 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 EOMESO95936 686 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 ZNF697Q5TEC3 545 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 RNF169Q8NCN4 708 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 TMEM161BQ8NDZ6 487 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 CNNM3Q8NE01 707 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 PGBD4Q96DM1 585 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 ADPGKQ9BRR6 497 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 TRIM9Q9C026 710 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 NKX2-4Q9H2Z4 354 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 YBX2Q9Y2T7 364 aaKnown RBP22.03■■□□□ 1.12
RER1-204ENST00000378518 RALGAPA2Q2PPJ7 1873 aa22.03■■□□□ 1.12
RER1-204ENST00000378518 A0A1B0GUA9 196 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 DGKIO75912 1065 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 CA3P07451 260 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 MYOGP15173 224 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 ASIC1P78348 528 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 PPP2R2DQ66LE6 453 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 SLC27A1Q6PCB7 646 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 HAUS6Q7Z4H7 955 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 APBB1IPQ7Z5R6 666 aaPredicted RBP22.02■■□□□ 1.12
RER1-204ENST00000378518 SFR1Q86XK3 245 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 HACE1Q8IYU2 909 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 C7orf25Q9BPX7 421 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 MRPL4Q9BYD3 311 aaKnown RBP22.02■■□□□ 1.12
RER1-204ENST00000378518 PANK4Q9NVE7 773 aa22.02■■□□□ 1.12
RER1-204ENST00000378518 ACTN4O43707 911 aaKnown RBP22.01■■□□□ 1.11
RER1-204ENST00000378518 ZNF623O75123 536 aa22.01■■□□□ 1.11
RER1-204ENST00000378518 MAPTP10636 758 aaKnown RBP22.01■■□□□ 1.11
RER1-204ENST00000378518 AFMP43652 599 aa22.01■■□□□ 1.11
RER1-204ENST00000378518 HERC4Q5GLZ8 1057 aaPredicted RBP22.01■■□□□ 1.11
RER1-204ENST00000378518 ABI1Q8IZP0 508 aa22.01■■□□□ 1.11
RER1-204ENST00000378518 CRIPAKQ8N1N5 446 aa22.01■■□□□ 1.11
RER1-204ENST00000378518 GOLPH3LQ9H4A5 285 aa22.01■■□□□ 1.11
RER1-204ENST00000378518 PCDHB2Q9Y5E7 798 aa22.01■■□□□ 1.11
RER1-204ENST00000378518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22■■□□□ 1.11
RER1-204ENST00000378518 FRMD3A2A2Y4 597 aa22■■□□□ 1.11
RER1-204ENST00000378518 BTG3Q14201 252 aaPredicted RBP22■■□□□ 1.11
RER1-204ENST00000378518 LONRF3Q496Y0 759 aa22■■□□□ 1.11
RER1-204ENST00000378518 UBXN11Q5T124 520 aa22■■□□□ 1.11
RER1-204ENST00000378518 ATF7IP2Q5U623 682 aa22■■□□□ 1.11
RER1-204ENST00000378518 CNNM4Q6P4Q7 775 aa22■■□□□ 1.11
RER1-204ENST00000378518 CMTR2Q8IYT2 770 aaKnown RBP22■■□□□ 1.11
RER1-204ENST00000378518 TMEM87AQ8NBN3 555 aa22■■□□□ 1.11
RER1-204ENST00000378518 ZNF689Q96CS4 500 aaPredicted RBP22■■□□□ 1.11
RER1-204ENST00000378518 PDZD7Q9H5P4 517 aa22■■□□□ 1.11
RER1-204ENST00000378518 MRPL44Q9H9J2 332 aaKnown RBP22■■□□□ 1.11
RER1-204ENST00000378518 KIAA1671Q9BY89 1806 aa21.99■■□□□ 1.11
RER1-204ENST00000378518 LCHNA4D1U4 455 aa21.99■■□□□ 1.11
RER1-204ENST00000378518 ZNF202O95125 648 aa21.99■■□□□ 1.11
RER1-204ENST00000378518 NPTXRO95502 500 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms