RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 HMGB1P1B2RPK0 211 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 PDE2AO00408 941 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 MEIS2O14770 477 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 RASGRF2O14827 1237 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 CDK17Q00537 523 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 MOXD1Q6UVY6 613 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 DEFB132Q7Z7B7 95 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 SESTD1Q86VW0 696 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 USP38Q8NB14 1042 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 SYN2Q92777 582 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 FGFBP2Q9BYJ0 223 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 MYOZ2Q9NPC6 264 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 HADHQ16836 314 aaKnown RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 SLC35G1Q2M3R5 365 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 Q4G0T1 1027 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 LRRC55Q6ZSA7 311 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 VSIG1Q86XK7 387 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 GMCL1P1Q8NEA9 526 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 ZIM3Q96PE6 472 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 RIT2Q99578 217 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 OSGEPQ9NPF4 335 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 SLC9A2Q9UBY0 812 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 EIF3DO15371 548 aaKnown RBP eCLIP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 WDR93Q6P2C0 686 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 CCDC137Q6PK04 289 aaKnown RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 PALM2Q8IXS6 379 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 ZKSCAN4Q969J2 545 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 THAP2Q9H0W7 228 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 MRPL47Q9HD33 250 aaKnown RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 JPH1Q9HDC5 661 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 MLXIPLQ9NP71 852 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF302Q9NR11 478 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 BAIAP2L1Q9UHR4 511 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 DISP2A7MBM2 1401 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 RNF8O76064 485 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 SLITRK3O94933 977 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 SOX10P56693 466 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 YWHAEP62258 255 aaKnown RBP9.08□□□□□ -0.96
PTPRK-206ENST00000368215 MXRA7P84157 204 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 TPCN2Q8NHX9 752 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 TRIM11Q96F44 468 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 IDI2Q9BXS1 227 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 DEFB129Q9H1M3 183 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 ACAD9Q9H845 621 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 VIPAS39Q9H9C1 493 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 HOXC10Q9NYD6 342 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 NID2Q14112 1375 aa9.08□□□□□ -0.96
PTPRK-206ENST00000368215 ZBTB22O15209 634 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 TKFCQ3LXA3 575 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 HP1BP3Q5SSJ5 553 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 CBWD2Q8IUF1 395 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 GPD1LQ8N335 351 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 CPA5Q8WXQ8 436 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 LPAR1Q92633 364 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ANKRD36BP1Q96IX9 119 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 TLR10Q9BXR5 811 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 TTC7AQ9ULT0 858 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ALG6Q9Y672 507 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 KCNJ1P48048 391 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 SLC12A3P55017 1021 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 KRT81Q14533 505 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 C2CD6Q53TS8 623 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 CASC4Q6P4E1 433 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF720Q7Z2F6 126 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF354CQ86Y25 554 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 GDAP1Q8TB36 358 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 CALN1Q9BXU9 219 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 IKZF4Q9H2S9 585 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 RBAKQ9NYW8 714 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 AGO2Q9UKV8 859 aaKnown RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 MYH2Q9UKX2 1941 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 BCL9LQ86UU0 1499 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 SYNJ2BP-COX16A0A087WUM0 186 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 GMPSP49915 693 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 PPP2R5DQ14738 602 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ANGEL2Q5VTE6 544 aaKnown RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ATP6V1G3Q96LB4 118 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 POP1Q99575 1024 aaKnown RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 FAM118BQ9BPY3 351 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ADPGKQ9BRR6 497 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 GLIS2Q9BZE0 524 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ZWILCHQ9H900 591 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 COX16Q9P0S2 106 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 TXNDC16Q9P2K2 825 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 STK38LQ9Y2H1 464 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 TISP43B9A030 160 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 ICAM1P05362 532 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 GLI1P08151 1106 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 P4HA1P13674 534 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 CNGA1P29973 690 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 GBP1P32455 592 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 GABPAQ06546 454 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 TMED2Q15363 201 aa9.07□□□□□ -0.96
PTPRK-206ENST00000368215 CEP128Q6ZU80 1094 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms