RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 RABEP1Q15276 862 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 UBXN11Q5T124 520 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 TMEM184AQ6ZMB5 413 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 AGMOQ6ZNB7 445 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 IFNLR1Q8IU57 520 aaPredicted RBP20.28■□□□□ 0.84
TMEM88-201ENST00000301599 MRPL43Q8N983 215 aaKnown RBP20.28■□□□□ 0.84
TMEM88-201ENST00000301599 SMRP1Q8NCR6 262 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 URGCPQ8TCY9 931 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 NRDE2Q9H7Z3 1164 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 UBN1Q9NPG3 1134 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 DBR1Q9UK59 544 aaKnown RBP20.28■□□□□ 0.84
TMEM88-201ENST00000301599 BARX2Q9UMQ3 279 aaPredicted RBP20.28■□□□□ 0.84
TMEM88-201ENST00000301599 NOL7Q9UMY1 257 aaKnown RBP20.28■□□□□ 0.84
TMEM88-201ENST00000301599 PLXNA4Q9HCM2 1894 aa20.28■□□□□ 0.84
TMEM88-201ENST00000301599 CNTNAP2Q9UHC6 1331 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 ATG2AQ2TAZ0 1938 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 MEIS3P2A8K0S8 358 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 HIDE1A8MVS5 230 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 INO80B-WBP1J3KQ70 363 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 CXCL14O95715 111 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 GALTP07902 379 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 SMC1AQ14683 1233 aaKnown RBP20.27■□□□□ 0.84
TMEM88-201ENST00000301599 TTC38Q5R3I4 469 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 CCDC51Q96ER9 411 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 LRFN3Q9BTN0 628 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 NFKBIZQ9BYH8 718 aa20.27■□□□□ 0.84
TMEM88-201ENST00000301599 ST18O60284 1047 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 MED24O75448 989 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 ALDH2P05091 517 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 NCLP19338 710 aaKnown RBP20.26■□□□□ 0.83
TMEM88-201ENST00000301599 GLRA2P23416 452 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 U2AF2P26368 475 aaKnown RBP eCLIP20.26■□□□□ 0.83
TMEM88-201ENST00000301599 RPA1P27694 616 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 CAPSQ13938 189 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 KCNC3Q14003 757 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 NOTUMQ6P988 496 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 DDX53Q86TM3 631 aaKnown RBP20.26■□□□□ 0.83
TMEM88-201ENST00000301599 VN1R2Q8NFZ6 395 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 ASAP3Q8TDY4 903 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 IGSF21Q96ID5 467 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 FAM193BQ96PV7 902 aaPredicted RBP20.26■□□□□ 0.83
TMEM88-201ENST00000301599 RSAD1Q9HA92 442 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 KIF3AQ9Y496 699 aa20.26■□□□□ 0.83
TMEM88-201ENST00000301599 C2orf71A6NGG8 1288 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 TSPAN1O60635 241 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 USO1O60763 962 aaKnown RBP20.25■□□□□ 0.83
TMEM88-201ENST00000301599 ITGA4P13612 1032 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 MUTP22033 750 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 RBM10P98175 930 aaKnown RBP20.25■□□□□ 0.83
TMEM88-201ENST00000301599 VPS52Q8N1B4 723 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 MCPH1Q8NEM0 835 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 GBP3Q9H0R5 595 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 CSRNP2Q9H175 543 aa20.25■□□□□ 0.83
TMEM88-201ENST00000301599 POLR3FQ9H1D9 316 aaPredicted RBP20.25■□□□□ 0.83
TMEM88-201ENST00000301599 UPF2Q9HAU5 1272 aaKnown RBP20.25■□□□□ 0.83
TMEM88-201ENST00000301599 USP15Q9Y4E8 981 aaPredicted RBP20.25■□□□□ 0.83
TMEM88-201ENST00000301599 DCXO43602 365 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 HOXB8P17481 243 aaPredicted RBP20.24■□□□□ 0.83
TMEM88-201ENST00000301599 MBTD1Q05BQ5 628 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 GIT2Q14161 759 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 PDIA5Q14554 519 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 ANKRD54Q6NXT1 300 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 MAEAQ7L5Y9 396 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 ZNF280BQ86YH2 543 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 C4orf32Q8N8J7 132 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 TMEM87AQ8NBN3 555 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 SMG8Q8ND04 991 aaKnown RBP20.24■□□□□ 0.83
TMEM88-201ENST00000301599 CPB2Q96IY4 423 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 TMEM175Q9BSA9 504 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 STK39Q9UEW8 545 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 FAN1Q9Y2M0 1017 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 IPPQ9Y573 584 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 STK24Q9Y6E0 443 aa20.24■□□□□ 0.83
TMEM88-201ENST00000301599 CA8P35219 290 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 SLC11A1P49279 550 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 FXR2P51116 673 aaKnown RBP eCLIP20.23■□□□□ 0.83
TMEM88-201ENST00000301599 LLGL2Q6P1M3 1020 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 HACE1Q8IYU2 909 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 CASP10Q92851 521 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 EIF2AQ9BY44 585 aaKnown RBP20.23■□□□□ 0.83
TMEM88-201ENST00000301599 DNAJB4Q9UDY4 337 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 LRWD1Q9UFC0 647 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 IRAK3Q9Y616 596 aa20.23■□□□□ 0.83
TMEM88-201ENST00000301599 ARHGEF35A5YM69 484 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 CLASP2O75122 1294 aaKnown RBP20.22■□□□□ 0.83
TMEM88-201ENST00000301599 DDHD2O94830 711 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 POMCP01189 267 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 ARF4P18085 180 aaPredicted RBP20.22■□□□□ 0.83
TMEM88-201ENST00000301599 AMHR2Q16671 573 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 HAUS3Q68CZ6 603 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 PADI6Q6TGC4 694 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 TMEM173Q86WV6 379 aaPredicted RBP20.22■□□□□ 0.83
TMEM88-201ENST00000301599 PHF7Q9BWX1 381 aaPredicted RBP20.22■□□□□ 0.83
TMEM88-201ENST00000301599 TRIM6Q9C030 488 aaPredicted RBP20.22■□□□□ 0.83
TMEM88-201ENST00000301599 ZBP1Q9H171 429 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 S1PR5Q9H228 398 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 C11orf16Q9NQ32 467 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 GPRC5CQ9NQ84 441 aa20.22■□□□□ 0.83
TMEM88-201ENST00000301599 A0A1B0GUA9 196 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms