RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 LRRC63Q05C16 580 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 PTK7Q13308 1070 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 FAM47CQ5HY64 1035 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 GJA10Q969M2 543 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
PHGDH-224ENST00000641711 VPS16Q9H269 839 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 PDLIM7Q9NR12 457 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 PRKAG2Q9UGJ0 569 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 TBX21Q9UL17 535 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 NOD1Q9Y239 953 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 ATP11BQ9Y2G3 1177 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 PPP2R2CQ9Y2T4 447 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
PHGDH-224ENST00000641711 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 B4GALT4O60513 344 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
PHGDH-224ENST00000641711 UBXN1Q04323 297 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 BFSP2Q13515 415 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 GRIK4Q16099 956 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 PTGISQ16647 500 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 TRIM65Q6PJ69 517 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 OTUD6AQ7L8S5 288 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 SERINC5Q86VE9 423 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 TMTC1Q8IUR5 882 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 CCDC65Q8IXS2 484 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 RETREG2Q8NC44 543 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 LMBR1Q8WVP7 490 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 RNPEPQ9H4A4 650 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 L2HGDHQ9H9P8 463 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 ANKEF1Q9NU02 776 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 TELO2Q9Y4R8 837 aa11.28□□□□□ -0.6
PHGDH-224ENST00000641711 MED24O75448 989 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 SLITRK3O94933 977 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 SPATA31C1P0DKV0 1188 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 INSRRP14616 1297 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 CYP11B2P19099 503 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 ATP4AP20648 1035 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 MARK3P27448 753 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 CASP14P31944 242 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 RFC5P40937 340 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.61
PHGDH-224ENST00000641711 SLC12A3P55017 1021 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 FAAP100Q0VG06 881 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 COASYQ13057 564 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 TARBP2Q15633 366 aaKnown RBP11.27□□□□□ -0.61
PHGDH-224ENST00000641711 UGCGQ16739 394 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 FIGNQ5HY92 759 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 FAM26FQ5R3K3 315 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-224ENST00000641711 DYMQ7RTS9 669 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 RSPH3Q86UC2 560 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 CATSPER3Q86XQ3 398 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 SYT2Q8N9I0 419 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-224ENST00000641711 DPF3Q92784 378 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 DYDC2Q96IM9 177 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 CNOT6LQ96LI5 555 aaKnown RBP11.27□□□□□ -0.61
PHGDH-224ENST00000641711 NACC1Q96RE7 527 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 ERGIC2Q96RQ1 377 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 TUBGCP2Q9BSJ2 902 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 NUP58Q9BVL2 599 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 SLC39A2Q9NP94 309 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 PANK4Q9NVE7 773 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
PHGDH-224ENST00000641711 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
PHGDH-224ENST00000641711 SMIM35A0A1B0GVV1 85 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 E9PMD0 336 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 STBD1O95210 358 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 KIF20AO95235 890 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 CCDC175P0C221 793 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 IDEP14735 1019 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 TMOD1P28289 359 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 YWHABP31946 246 aaKnown RBP11.26□□□□□ -0.61
PHGDH-224ENST00000641711 RFC2P35250 354 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 CDC42EP1Q00587 391 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 ZCWPW2Q504Y3 356 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 LRRC55Q6ZSA7 311 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 TOGARAM2Q6ZUX3 1019 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 MTERF4Q7Z6M4 381 aaKnown RBP11.26□□□□□ -0.61
PHGDH-224ENST00000641711 GPBP1Q86WP2 473 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 ZC3H3Q8IXZ2 948 aaKnown RBP11.26□□□□□ -0.61
PHGDH-224ENST00000641711 C7orf61Q8IZ16 206 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 MYOCDQ8IZQ8 938 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 NME8Q8N427 588 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 HPS3Q969F9 1004 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 CCDC43Q96MW1 224 aaKnown RBP11.26□□□□□ -0.61
PHGDH-224ENST00000641711 UIMC1Q96RL1 719 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 TSG101Q99816 390 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 NOC4LQ9BVI4 516 aaKnown RBP11.26□□□□□ -0.61
PHGDH-224ENST00000641711 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 CYP26B1Q9NR63 512 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 ABHD10Q9NUJ1 306 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 TMEM39AQ9NV64 488 aa11.26□□□□□ -0.61
PHGDH-224ENST00000641711 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms