RNA–Protein interactions for RNA: ENST00000639498.1

KCNMA1-263, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-263ENST00000639498 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-263ENST00000639498 COL5A2P05997 1499 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-263ENST00000639498 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.35
KCNMA1-263ENST00000639498 VCXQ9H320 206 aa12.83□□□□□ -0.35
KCNMA1-263ENST00000639498 MT-ND3P03897 115 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 NR3C2P08235 984 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 STAT5BP51692 787 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 DUOXA2Q1HG44 320 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 ARL13BQ3SXY8 428 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 DSTYKQ6XUX3 929 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 RHPN2Q8IUC4 686 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 TC2NQ8N9U0 490 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 DNAAF3Q8N9W5 541 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 MKNK1Q9BUB5 465 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 ASNSD1Q9NWL6 643 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 HPSEQ9Y251 543 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 SNX24Q9Y343 169 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 PSMD14O00487 310 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 CHRNA3P32297 505 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 NAA25Q14CX7 972 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 RPS6KA2Q15349 733 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 TMED2Q15363 201 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 TRIP13Q15645 432 aaPredicted RBP12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 BBS9Q3SYG4 887 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 RBM43Q6ZSC3 357 aaKnown RBP12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 SCYL1Q96KG9 808 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 SPATA33Q96N06 139 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 WDR24Q96S15 920 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 CHP1Q99653 195 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 NUP85Q9BW27 656 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 STK33Q9BYT3 514 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 WNT8AQ9H1J5 351 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 SLITRK6Q9H5Y7 841 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 UBE4BO95155 1302 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 EVI5O60447 810 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 GNA15P30679 374 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 GRIN1Q05586 938 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 KYAT1Q16773 422 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 LRFN2Q9ULH4 789 aa12.83□□□□□ -0.36
KCNMA1-263ENST00000639498 GOLGA8CPA6NN73 597 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 MOXD1Q6UVY6 613 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 PYROXD1Q8WU10 500 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 ZDHHC15Q96MV8 337 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 STK38LQ9Y2H1 464 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 EIF3DO15371 548 aaKnown RBP eCLIP12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 SH3BP5O60239 455 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 SLCO1A2P46721 670 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 MAP7Q14244 749 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 NTRK3Q16288 839 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 MXRA8Q9BRK3 442 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 POLLQ9UGP5 575 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 NPHP3-ACAD11A0A0J9YXS1 232 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 TCRBV5S4A2TA0A5A2 114 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 TYW5A2RUC4 315 aaKnown RBP12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 FAM187AA6NFU0 413 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 SALL1Q9NSC2 1324 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
KCNMA1-263ENST00000639498 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 TADA3O75528 432 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 GGPS1O95749 300 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 PLS3P13797 630 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 UCHL3P15374 230 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 ECE1P42892 770 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 LIG3P49916 1009 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 SNRPFP62306 86 aaKnown RBP12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 IRX4P78413 519 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 IFT88Q13099 833 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 PHLDB3Q6NSJ2 640 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 RUBCNQ92622 972 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 AGPAT1Q99943 283 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 POLR3CQ9BUI4 534 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 RTFDC1Q9BY42 306 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 ZWILCHQ9H900 591 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 HSPBP1Q9NZL4 362 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 IP6K2Q9UHH9 426 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 SNX12Q9UMY4 172 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 HUS1O60921 280 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 KRT7P08729 469 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 FMO5P49326 533 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 RNF139Q8WU17 664 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 EHD4Q9H223 541 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 DONSONQ9NYP3 566 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 HDAC6Q9UBN7 1215 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 PLAAQ9Y263 795 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 TACC3Q9Y6A5 838 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 NOL3O60936 208 aaKnown RBP12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 ATP1A1P05023 1023 aaKnown RBP12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 ZNF18P17022 549 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 ZNF746Q6NUN9 644 aaPredicted RBP12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 PASD1Q8IV76 773 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 RHOT1Q8IXI2 618 aa12.81□□□□□ -0.36
KCNMA1-263ENST00000639498 SPATA4Q8NEY3 305 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms