RNA–Protein interactions for RNA: ENST00000608853.5

ATXN2-226, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 4,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-226ENST00000608853 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 SLC7A3Q8WY07 619 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 C11orf70Q9BRQ4 267 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 SMYD2Q9NRG4 433 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 ZNF233A6NK53 670 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 PHF2O75151 1096 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 ECE1P42892 770 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 TMED1Q13445 227 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 NSMCE1Q8WV22 266 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 CSRNP1Q96S65 589 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 EFHD1Q9BUP0 239 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 SEL1LQ9UBV2 794 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 G3BP2Q9UN86 482 aaKnown RBP13.2□□□□□ -0.3
ATXN2-226ENST00000608853 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 CSF1RP07333 972 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 SLC9A1P19634 815 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 PDE6BP35913 854 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 VAMP7P51809 220 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 SLC30A9Q6PML9 568 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 PDZD4Q76G19 769 aaPredicted RBP13.2□□□□□ -0.3
ATXN2-226ENST00000608853 AGGF1Q8N302 714 aaeCLIP13.2□□□□□ -0.34e-6■■□□□ 11.8
ATXN2-226ENST00000608853 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 VCPKMTQ9H867 229 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
ATXN2-226ENST00000608853 GOLGA8QA0A0J9YX86 632 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 GOLGA8OA6NCC3 632 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 GOLGA8NF8WBI6 632 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 STXBP3O00186 592 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 CFLARO15519 480 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 SNAP25P60880 206 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 GPS1Q13098 491 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 RAPH1Q70E73 1250 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 MARCH10Q8NA82 808 aaPredicted RBP13.19□□□□□ -0.3
ATXN2-226ENST00000608853 AGPAT1Q99943 283 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 SUDS3Q9H7L9 328 aaPredicted RBP13.19□□□□□ -0.3
ATXN2-226ENST00000608853 A0A087X0T9 212 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 TMEM120BA0PK00 339 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 GSTA1P08263 222 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 GSTA2P09210 222 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 FAM228BP0C875 321 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 TROAPQ12815 778 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 SLC29A2Q14542 456 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 C12orf60Q5U649 245 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 TTI2Q6NXR4 508 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 ZBED8Q8IZ13 594 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 SYN2Q92777 582 aaPredicted RBP13.19□□□□□ -0.3
ATXN2-226ENST00000608853 CELF1Q92879 486 aaKnown RBP13.19□□□□□ -0.3
ATXN2-226ENST00000608853 ERP27Q96DN0 273 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 FGD4Q96M96 766 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 PI4KBQ9UBF8 816 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 H0YIN7 160 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 EPHB1P54762 984 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 EDRF1Q3B7T1 1238 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 METTL13Q8N6R0 699 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
ATXN2-226ENST00000608853 STK33Q9BYT3 514 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 NXF1Q9UBU9 619 aaKnown RBP13.19□□□□□ -0.3
ATXN2-226ENST00000608853 AFG3L2Q9Y4W6 797 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
ATXN2-226ENST00000608853 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
ATXN2-226ENST00000608853 KRT38O76015 456 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 ZBED1O96006 694 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 AP2B1P63010 937 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 TFAMQ00059 246 aaKnown RBP13.18□□□□□ -0.3
ATXN2-226ENST00000608853 PDIA2Q13087 525 aaKnown RBP13.18□□□□□ -0.3
ATXN2-226ENST00000608853 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 RAPGEF5Q92565 580 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 TRABDQ9H4I3 376 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 CDK17Q00537 523 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 NTRK3Q16288 839 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 PDZD8Q8NEN9 1154 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 C9orf72Q96LT7 481 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 ZWILCHQ9H900 591 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 APOBEC2Q9Y235 224 aaKnown RBP13.18□□□□□ -0.3
ATXN2-226ENST00000608853 BBOX1O75936 387 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 ART3Q13508 389 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 TMCO4Q5TGY1 634 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 PASD1Q8IV76 773 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 RHOT1Q8IXI2 618 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 ATL2Q8NHH9 583 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 SUCLA2Q9P2R7 463 aaPredicted RBP13.18□□□□□ -0.3
ATXN2-226ENST00000608853 EMSYQ7Z589 1322 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 CAPN9O14815 690 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 TTC4O95801 387 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 SCTRP47872 440 aa13.18□□□□□ -0.3
ATXN2-226ENST00000608853 AARSP49588 968 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■■■■■ 61.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms