RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 AGPAT5Q9NUQ2 364 aa28.49■■■□□ 2.15
TRIM28-204ENST00000594806 ODF2LQ9ULJ1 636 aa28.49■■■□□ 2.15
TRIM28-204ENST00000594806 PCDHB7Q9Y5E2 793 aa28.49■■■□□ 2.15
TRIM28-204ENST00000594806 PHLPP2Q6ZVD8 1323 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 UPP2O95045 317 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 SKIP12755 728 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 EFNA5P52803 228 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 MBTD1Q05BQ5 628 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 DMP1Q13316 513 aaPredicted RBP28.48■■■□□ 2.15
TRIM28-204ENST00000594806 MCM6Q14566 821 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 GPBP1Q86WP2 473 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 DEPTORQ8TB45 409 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 PRIMPOLQ96LW4 560 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 FAM13BQ9NYF5 915 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 LRFN2Q9ULH4 789 aa28.48■■■□□ 2.15
TRIM28-204ENST00000594806 PIN4Q9Y237 131 aaKnown RBP28.48■■■□□ 2.15
TRIM28-204ENST00000594806 YBX2Q9Y2T7 364 aaKnown RBP28.48■■■□□ 2.15
TRIM28-204ENST00000594806 A0A0U1RQF3 1178 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 STAT6P42226 847 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 MAPK7Q13164 816 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 FAM187BQ17R55 369 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 SHC4Q6S5L8 630 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 TMCO2Q7Z6W1 182 aaPredicted RBP28.47■■■□□ 2.15
TRIM28-204ENST00000594806 DAW1Q8N136 415 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 LRRC15Q8TF66 581 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 BSNDQ8WZ55 320 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 CCDC51Q96ER9 411 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 YME1L1Q96TA2 773 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 PYM1Q9BRP8 204 aaKnown RBP28.47■■■□□ 2.15
TRIM28-204ENST00000594806 CUEDC2Q9H467 287 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 PRMT7Q9NVM4 692 aaPredicted RBP28.47■■■□□ 2.15
TRIM28-204ENST00000594806 TMEM161AQ9NX61 479 aa28.47■■■□□ 2.15
TRIM28-204ENST00000594806 RAB27AP51159 221 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 NAALADL2Q58DX5 795 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 ARSHQ5FYA8 562 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 ADALQ6DHV7 355 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 FAM117BQ6P1L5 589 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 PPP4R3CPQ6ZMV5 832 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 SV2BQ7L1I2 683 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 NTPCRQ9BSD7 190 aaKnown RBP28.46■■■□□ 2.15
TRIM28-204ENST00000594806 NKX2-4Q9H2Z4 354 aa28.46■■■□□ 2.15
TRIM28-204ENST00000594806 LARSQ9P2J5 1176 aaKnown RBP28.46■■■□□ 2.15
TRIM28-204ENST00000594806 RBM19Q9Y4C8 960 aaKnown RBP28.46■■■□□ 2.15
TRIM28-204ENST00000594806 COL4A6Q14031 1691 aa28.45■■■□□ 2.15
TRIM28-204ENST00000594806 EOMESO95936 686 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 CA3P07451 260 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 PLS3P13797 630 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 DHX8Q14562 1220 aaKnown RBP28.45■■■□□ 2.14
TRIM28-204ENST00000594806 MAPK6Q16659 721 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 RESP18Q5W5W9 173 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 TWF2Q6IBS0 349 aaKnown RBP28.45■■■□□ 2.14
TRIM28-204ENST00000594806 SP7Q8TDD2 431 aaPredicted RBP28.45■■■□□ 2.14
TRIM28-204ENST00000594806 SPIRE2Q8WWL2 714 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 FZD8Q9H461 694 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 ZNF576Q9H609 170 aa28.45■■■□□ 2.14
TRIM28-204ENST00000594806 RBAK-RBAKDNI3L0D1 243 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 HOXA2O43364 376 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 TSPAN1O60635 241 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 DGKIO75912 1065 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 KRT18P05783 430 aaKnown RBP28.44■■■□□ 2.14
TRIM28-204ENST00000594806 MYOGP15173 224 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 SCP2P22307 547 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 HOXA11P31270 313 aaPredicted RBP28.44■■■□□ 2.14
TRIM28-204ENST00000594806 SMTNP53814 917 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 PEX3P56589 373 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 PPP2R2DQ66LE6 453 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 NOTUMQ6P988 496 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 IQUBQ8NA54 791 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 RSPH1Q8WYR4 309 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 LRRC27Q9C0I9 530 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 SEMA6BQ9H3T3 888 aa28.44■■■□□ 2.14
TRIM28-204ENST00000594806 CCDC169A6NNP5 214 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 H0YCG3 227 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 ZNF623O75123 536 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 NPTX2P47972 431 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 AMHR2Q16671 573 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 ECHDC2Q86YB7 292 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 ZNF689Q96CS4 500 aaPredicted RBP28.43■■■□□ 2.14
TRIM28-204ENST00000594806 PANK2Q9BZ23 570 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 TMEM134Q9H6X4 195 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 RC3H2Q9HBD1 1191 aaKnown RBP28.43■■■□□ 2.14
TRIM28-204ENST00000594806 POLD4Q9HCU8 107 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 KMT5AQ9NQR1 393 aa28.43■■■□□ 2.14
TRIM28-204ENST00000594806 A0A087X0B3 334 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 CMA1P23946 247 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 ZNF131P52739 623 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 GIT2Q14161 759 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 DEFB123Q8N688 67 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 PDILTQ8N807 584 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 CNNM3Q8NE01 707 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 REEP2Q9BRK0 252 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 CCDC113Q9H0I3 377 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 MAGEF1Q9HAY2 307 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 FAM105AQ9NUU6 356 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 ARHGAP28Q9P2N2 729 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 MYO9BQ13459 2157 aa28.42■■■□□ 2.14
TRIM28-204ENST00000594806 K7ERI5 159 aa28.41■■■□□ 2.14
TRIM28-204ENST00000594806 ACKR2O00590 384 aa28.41■■■□□ 2.14
TRIM28-204ENST00000594806 FAM13AO94988 1023 aa28.41■■■□□ 2.14
TRIM28-204ENST00000594806 RAD51AP2Q09MP3 1159 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms